Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G20
         (850 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      29   0.24 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.72 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.1  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   5.1  

>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 28.7 bits (61), Expect = 0.24
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 506 FVVVYDHIFVLQLE*TDIPCEKPMTLNPFDSFGSAANFSHTYST 375
           F+  Y+H  V+QL  + IPC  P  +N         +++  YST
Sbjct: 55  FLPKYEHTHVMQLSTSAIPCCSPKKMNSIRLLYFDMSYNVIYST 98


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.72
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 605 LPHIITCFVSQGTTMRYAIDA 543
           +PH+  C +S GTT RY   A
Sbjct: 394 VPHVSQCPISPGTTFRYTFRA 414


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 346 NGYFMNPNLQVEYVCEKLAADPKLSNGFNVMGFSQGMSVYSSCSTKM 486
           +G    P+ + E +    AAD  + +G     F Q    +S CST++
Sbjct: 424 HGPIQLPHSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTEV 470


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +1

Query: 346 NGYFMNPNLQVEYVCEKLAADPKLSNGFNVMGFSQGMSVYSSCSTKM 486
           +G    P+ + E +    AAD  + +G     F Q    +S CST++
Sbjct: 424 HGPIQLPHSESEELSMSTAADTAVPSGIKSPAFKQPAFSHSVCSTEV 470


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 869,860
Number of Sequences: 2352
Number of extensions: 18000
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)