Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G20
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl prote...   100   1e-21
AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl pro...   100   1e-21
Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical ...    29   5.5  

>U50313-5|AAA92329.1|  270|Caenorhabditis elegans Palmitoyl protein
           thioesteraseprotein 1 protein.
          Length = 270

 Score =  100 bits (240), Expect = 1e-21
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = +1

Query: 211 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 390
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 391 EKLAADPKLSNGFNVMGFSQG 453
            K+  DP+L NG+N +GFSQG
Sbjct: 61  IKIKNDPELKNGYNAIGFSQG 81



 Score = 74.5 bits (175), Expect = 8e-14
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +3

Query: 540 KGIYGIPHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLA 719
           +G++G P+C    +  C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLA
Sbjct: 108 QGVFGAPYCIG-DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLA 166

Query: 720 DINNVRTVNKTYIQNLNNL 776
           DINN    N TY +NL +L
Sbjct: 167 DINNENNNNPTYKRNLLSL 185



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 449 RGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQG 544
           +G QF+RAV QRC +  P +KN+VS+GGQHQG
Sbjct: 80  QGAQFLRAVAQRCPN--PPMKNLVSVGGQHQG 109


>AY691522-1|AAU01161.1|  254|Caenorhabditis elegans palmitoyl
           protein thioesterase protein.
          Length = 254

 Score =  100 bits (240), Expect = 1e-21
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = +1

Query: 211 LWHGMGDTCCMSFSLGSFKIFLEKNIPGVYVLSLQIGNNTVEDFENGYFMNPNLQVEYVC 390
           +WHGMGD CC   S+GS K   E+ IPGVYV SLQ+G++  +D E+G++ N N  V   C
Sbjct: 1   MWHGMGDCCCNPLSMGSVKKLFEEQIPGVYVHSLQLGSSITKDIEHGFYANTNELVYMAC 60

Query: 391 EKLAADPKLSNGFNVMGFSQG 453
            K+  DP+L NG+N +GFSQG
Sbjct: 61  IKIKNDPELKNGYNAIGFSQG 81



 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 35/79 (44%), Positives = 50/79 (63%)
 Frame = +3

Query: 540 KGIYGIPHCGALRHETCDDVRKLLNYAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLA 719
           +G++G P+C    +  C+ VR+L++  AY  +VQ  +VQA YWHDP     Y+  S+FLA
Sbjct: 108 QGVFGAPYCIG-DNIMCNGVRRLIDLGAYLPFVQKRVVQAQYWHDPNQVXEYKKRSIFLA 166

Query: 720 DINNVRTVNKTYIQNLNNL 776
           DINN    N TY +NL +L
Sbjct: 167 DINNENNNNPTYKRNLLSL 185



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = +2

Query: 449 RGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQG 544
           +G QF+RAV QRC +  P +KN+VS+GGQHQG
Sbjct: 80  QGAQFLRAVAQRCPN--PPMKNLVSVGGQHQG 109


>Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical
           protein R10H10.7 protein.
          Length = 915

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 419 QTDSMSWVSHRGCQFIRAVVQRCGHKLPQIKNMVSLGGQHQGHLWHTSLWCLETRN 586
           QT+S+ WV      F    + +   ++  +KN+V +   H   L   SL C+ + N
Sbjct: 591 QTNSLDWVVRESADFSLKTLAKQDSRIKDVKNLVGIYSSH--ILNQVSLACMSSDN 644


>AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical
           protein Y43F4B.5a protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +3

Query: 615 YAAYNSWVQNSLVQATYWHDPLXERTYEANSVFLADINNVRTVNKTYIQNLNNL 776
           YA YN +  + LV++TYW  P  E T +  S   AD+     + +  + ++ +L
Sbjct: 451 YALYNRYGFH-LVRSTYWMVPAPEVTKKLFSTLRADLKFPTKIGEAEVASVRDL 503


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,985,366
Number of Sequences: 27780
Number of extensions: 394125
Number of successful extensions: 788
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)