Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G19
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   4.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   7.0  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 342 GGTSIMLVSSEGPSSSFLVVVF 277
           GGT+I+ +S+   +S +L +VF
Sbjct: 294 GGTAIVSISTSVSTSVYLAIVF 315


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 437 CVYAYVAYITMVVCKHHFY 381
           C+Y +V  +  ++C ++FY
Sbjct: 132 CIYYFVVPLFFLLCIYYFY 150


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 242 SLYNSTKSETIANTTTKKDEDGPS 313
           +L N T  +   N   KKD+D P+
Sbjct: 102 TLINETSLQLDENKLDKKDDDSPA 125


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 224 NSFAQPSLYNSTKSETIANTTTKKDEDG 307
           N F   S     K++   + T+KKD+DG
Sbjct: 59  NRFRLRSRPGHRKTDNSLSATSKKDKDG 86


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 718 NTRFMFWIVTSRXRXLQFPN 659
           NT+ + W+ TS  R  + PN
Sbjct: 294 NTKKLQWLDTSHNRISEIPN 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,202
Number of Sequences: 336
Number of extensions: 4108
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)