Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G19
         (843 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g50730.1 68416.m05550 protein kinase, putative similar to pro...    28   6.8  
At2g11626.1 68415.m01251 hypothetical protein                          28   6.8  
At2g38100.1 68415.m04677 proton-dependent oligopeptide transport...    28   8.9  

>At3g50730.1 68416.m05550 protein kinase, putative similar to
           protein kinase ATN1 [Arabidopsis thaliana]
           gi|1054633|emb|CAA63387
          Length = 370

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 136 DYTEHNYASEHRYHFNIEQTFSNSRNDLFITQIL 35
           +Y  HN + +  +HF+I +     RND+ + +++
Sbjct: 9   NYPSHNESDDEPFHFSISRELLLDRNDVVVGEMI 42


>At2g11626.1 68415.m01251 hypothetical protein
          Length = 242

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query: 85  QY*NDICVPTRSC-AQCSLKLIYLC--FWSAYFDPGYS 189
           Q+ +D C  +  C A+ S + IYL   FW   F PGYS
Sbjct: 19  QFQSDCCSVSLFCVAKASTREIYLLISFWQGNFCPGYS 56


>At2g38100.1 68415.m04677 proton-dependent oligopeptide transport
           (POT) family protein low similarity to SP|P46032 Peptide
           transporter PTR2-B (Histidine transporting protein)
           {Arabidopsis thaliana}; contains Pfam profile PF00854:
           POT family
          Length = 521

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -1

Query: 753 INRRRENRYIWIIRVLC-FGL*LLEXVVYNF 664
           IN+ R + Y W+I V C F L L   V Y +
Sbjct: 470 INKSRVDNYYWVITVFCMFNLLLYFIVTYRY 500


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,005,078
Number of Sequences: 28952
Number of extensions: 347498
Number of successful extensions: 905
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)