Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G18
(937 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0309 - 23987669-23988042,23989485-23989560 37 0.020
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 36 0.035
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 36 0.046
03_02_0817 + 11492699-11492774,11493605-11493978 36 0.046
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 36 0.046
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 36 0.046
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 35 0.081
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 33 0.25
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 32 0.75
03_06_0166 - 32112140-32112877,32112888-32112977 30 3.0
02_02_0358 + 9373440-9373500,9375106-9375632 29 5.3
02_02_0356 + 9336558-9337091 29 5.3
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 29 5.3
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 28 9.3
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 37.1 bits (82), Expect = 0.020
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + AKK KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--MAKKMKDTDSEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ ++ D DG I
Sbjct: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQI 137
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 36.3 bits (80), Expect = 0.035
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--MARKMKDTDSEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ ++ D DG I
Sbjct: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVEEMIREA--DVDGDGQI 137
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 35.9 bits (79), Expect = 0.046
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--MARKMKDTDSEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ ++ D DG I
Sbjct: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQI 137
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 35.9 bits (79), Expect = 0.046
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--MARKMKDTDSEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ ++ D DG I
Sbjct: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQI 137
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 35.9 bits (79), Expect = 0.046
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + ++ +DKD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMISEVDTDSNGNIEFKEFLGLMARKLRDKD--SEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ + D DG I
Sbjct: 91 RVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEA--DVDGDGQI 137
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 35.9 bits (79), Expect = 0.046
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--MARKMKDTDSEEELKEAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK++NG + D EV E+ ++ D DG I
Sbjct: 91 RVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DVDGDGQI 137
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 35.1 bits (77), Expect = 0.081
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Frame = +1
Query: 139 GRLSPSQSTTLKAKARSMPST-LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FL 312
GR S ++S K A ++ S LG ++ +L +PT A + FL
Sbjct: 17 GRRSINESRR-KCNAGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFL 75
Query: 313 PIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKD 492
+ A+K +D GA +D E +++DK++NG + D E+A++ +
Sbjct: 76 GLL--ARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHE 133
Query: 493 CMDPEDDDGMI 525
D DG I
Sbjct: 134 A--DSDGDGQI 142
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 33.5 bits (73), Expect = 0.25
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 328 AKKDKDQGAYEDFLECLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 507
A+K +D GA +D + +++DK++NG + D E+A++ +
Sbjct: 522 ARKLRDTGAEDDIRDAFRVFDKDQNGFITPDELRHVMANLSDPLSDDELADMLHEA--DS 579
Query: 508 DDDGMI 525
D DG I
Sbjct: 580 DGDGQI 585
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 403 RFRSCHTASDIPGNLHTLPGL-CLSLLGCR 317
RF+SC+ D+P LH+LP L L + CR
Sbjct: 1745 RFKSCYDLVDLPAGLHSLPSLKRLEIWWCR 1774
>03_06_0166 - 32112140-32112877,32112888-32112977
Length = 275
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 499 DPEDDDGMIPLPSIPEEXHGR 561
+P+D DG I LP +PE H R
Sbjct: 31 NPQDSDGKIQLPHLPEVVHNR 51
>02_02_0358 + 9373440-9373500,9375106-9375632
Length = 195
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 400 FRSCHTASDIPGNLHTLPGLC-LSLLGC 320
F CH +P LH L +C L ++GC
Sbjct: 122 FYECHRLQSLPEGLHLLSSICTLGIVGC 149
>02_02_0356 + 9336558-9337091
Length = 177
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 400 FRSCHTASDIPGNLHTLPGLC-LSLLGC 320
F CH +P LH L +C L ++GC
Sbjct: 104 FYECHRLQSLPEGLHLLSSICTLGIVGC 131
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 400 FRSCHTASDIPGNLHTLPGLC-LSLLGC 320
F CH +P LH L +C L ++GC
Sbjct: 1197 FYECHRLQSLPEGLHLLSSICTLGIVGC 1224
>02_05_0999 +
33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 693 GSGRRVPSVXGLSGLLRVPRPSHIRRQGKV 604
G+ +P + GL L VPRPSH +R G++
Sbjct: 177 GNESGIPDIAGLRHL-NVPRPSHSQRYGEM 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,633,300
Number of Sequences: 37544
Number of extensions: 441047
Number of successful extensions: 1293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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