Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G18
(937 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 41 0.002
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 40 0.004
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 34 0.14
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 32 0.58
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 32 0.77
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 31 1.0
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 31 1.0
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 31 1.3
SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0) 31 1.3
SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7) 31 1.8
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 30 3.1
SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7) 29 4.1
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7) 29 4.1
SB_37193| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6) 29 7.1
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 28 9.4
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 196 STLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLE 372
S LG++LR L NPT A + FLP+Y K + + EDF++
Sbjct: 31 SQLGEVLRGLGQNPTNAEVKKIVSEMDPEGGNRISFEEFLPVYQSYMGKKPKFSTEDFVD 90
Query: 373 CLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPE 507
L+++D + +G++ DSEV + + D +
Sbjct: 91 SLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLIQGLEDKQ 135
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
+G LLR+L NPT A + FLPIY+ A + K G+ ++F+E L
Sbjct: 536 IGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTSAYQKKQTGSADEFVEGL 595
Query: 379 KLYDKNENG 405
+++D++ G
Sbjct: 596 RVFDRDGTG 604
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +1
Query: 208 DLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLY 387
D+LRA+ NP + I FL +Y K K QG E+F+E L+ +
Sbjct: 34 DVLRAVGLNPQIDDIKKTEKELGTKPVSFDS--FLSLYVSYSK-KPQGGMEEFIEGLRAF 90
Query: 388 DKNENGLM 411
D N +G M
Sbjct: 91 DNNSDGTM 98
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 108 MSDLSKNDVERASFAFSIYDFEGKGKIDA 194
M DL+ + AFS++D GKG IDA
Sbjct: 1 MVDLNDEQIGELKDAFSLFDKTGKGYIDA 29
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 33.5 bits (73), Expect = 0.25
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K KD + E+ E
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKDTDSEEEIREAF 90
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK+ NG + D EV E+ ++ D DG +
Sbjct: 91 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQV 137
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 32.3 bits (70), Expect = 0.58
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 1/111 (0%)
Frame = +1
Query: 196 STLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLE 372
S L ++R+L NPT + FL + AKK K+ E+ +
Sbjct: 310 SELAHVMRSLGQNPTEQELKDMIAEVDQDDNGEIDFPEFLQMV--AKKIKETDTEEEIQD 367
Query: 373 CLKLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
K++DKN +G++ D EV E+ ++ D DGMI
Sbjct: 368 AFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA--DIDGDGMI 416
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 84 GNRQTPHKMSDLSKNDVERASFAFSIY 164
GN T +MSD+ ++D++ AS+AFSI+
Sbjct: 87 GNNLTTSEMSDIYESDIDPASWAFSIW 113
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K K+ + E+ E
Sbjct: 22 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKNTDSEEEIREAF 79
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK+ NG + D EV E+ ++ D DG +
Sbjct: 80 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQV 126
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 31.5 bits (68), Expect = 1.0
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +1
Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECL 378
LG ++R+L NPT A + FL + A+K K+ + E+ E
Sbjct: 22 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--MARKMKNTDSEEEIREAF 79
Query: 379 KLYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMI 525
+++DK+ NG + D EV E+ ++ D DG +
Sbjct: 80 RVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DIDGDGQV 126
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 311 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLHXVRSLTTVKSLKSQR 490
FP K RK R +KIS+ SCM+ TK + + SH + + S+TTV + S
Sbjct: 277 FPKDQKLRKIFNRNTIKISY---SCMSNTKQI----IDSHNKRI-IASSITTVDAPTSLA 328
Query: 491 TA 496
TA
Sbjct: 329 TA 330
>SB_36879| Best HMM Match : Hormone_recep (HMM E-Value=0)
Length = 358
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 184 LPLPSKS*IEKAK-DALSTSFLLRSLILCGVCRFPPGSSLADVQD 53
LP P+ S + A D+ S S LLR L+ C P G SL D+++
Sbjct: 108 LPSPTPSSPDTAHIDSTSISPLLRDLLASNPCVVPKGESLKDIEE 152
>SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7)
Length = 760
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 216 ESAQLKPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGSV*R 362
+ A L + R ++WY A+T V +H++ R+RP SV R
Sbjct: 703 DGAHLIQYKDGVRRSQWYHIRAFVLAYTNSVATHVEADPSRRRPPSVDR 751
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 81 GGNRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGRSPESAQ 227
GG R+ +L++ + AF ++D +G G IDA L +S +
Sbjct: 11 GGQRKKTGPKPELTEEQKQEIREAFDLFDTDGSGTIDAKELKSEKDSKE 59
>SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 252
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 311 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLHXVRSLTTVKSLKSQR 490
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 54 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRI-IASSITTEDAPTSLA 105
Query: 491 TA 496
TA
Sbjct: 106 TA 107
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 293 SHSKSSFPSTAKQRKTKTRERMKISWNV*SCMTRT 397
SHS +F S R KT+ +++I NV C+T+T
Sbjct: 8 SHSTGAFTSFKSNRVHKTQCKIQIDTNVLRCLTQT 42
>SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 151
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 311 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLHXVRSLTTVKSLKSQR 490
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 4 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRI-IASSITTEDAPTSLA 55
Query: 491 TA 496
TA
Sbjct: 56 TA 57
>SB_37193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 401 TVSCLALSSHTRFLHXVRSLTTVKSLKSQRTAWTLKTMTA*SPYPAFLKXVMAVKDITTR 580
T+S +++ SH FLH +R + S+ + + L S +P ++ + + I+ R
Sbjct: 128 TISSISVRSHRYFLHQLRDPIAISSISVRSHRYFLHQYEIPSLFPPSVQDPITISSISAR 187
>SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6)
Length = 297
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 84 GNRQTPHKMSDLSKNDVERASFAFSIY 164
GN T +SD+ ++D+ AS+AFSI+
Sbjct: 44 GNNLTTSDISDIYESDINPASWAFSIW 70
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 364 FLECLKLYDKNENGLM 411
F+EC K++D+N NGL+
Sbjct: 7 FMECFKVFDRNGNGLI 22
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,165,494
Number of Sequences: 59808
Number of extensions: 487826
Number of successful extensions: 1188
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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