Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G18
         (937 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...   111   4e-26

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score =  111 bits (266), Expect = 4e-26
 Identities = 55/109 (50%), Positives = 63/109 (57%)
 Frame = +1

Query: 202 LGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFLECLK 381
           LG+ LRALN NPT+  I                  FLPI+SQ KK+K+QG +EDFLECLK
Sbjct: 33  LGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQGCFEDFLECLK 92

Query: 382 LYDKNENGLMXXXXXXXXXXXXXXXXDDSEVAEVTKDCMDPEDDDGMIP 528
           LYDKNE+G M                DD E+  V KDCMDPEDDDG IP
Sbjct: 93  LYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIP 141



 Score = 46.4 bits (105), Expect = 1e-06
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +3

Query: 111 SDLSKNDVERASFAFSIYDFEGKGKIDAFNLGRSPESAQLKP 236
           +DL   ++E+A F FS+YD+EG G++DA +LG +  +  L P
Sbjct: 3   NDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNP 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,619
Number of Sequences: 2352
Number of extensions: 13869
Number of successful extensions: 255
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)