Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G18
         (937 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   7.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   7.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 732 RXPTGGXLAPPXXGSGRRVPSVXGLSGLLRVP 637
           R P GG L P        +P++  +SG+  +P
Sbjct: 402 RSPAGGQLPPSAGAPMPPIPNMSNMSGMPPLP 433


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 621 ECAMAWGPLKDPK 659
           +C ++W PL  PK
Sbjct: 428 DCLISWNPLMQPK 440


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 7.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 608 FPCRRMCDGLGTLKR 652
           + C R+C+ LG +KR
Sbjct: 245 YNCERLCNRLGRVKR 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,197
Number of Sequences: 438
Number of extensions: 4334
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)