Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G15
         (865 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   4.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   4.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   7.1  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 18  HYREFLRFKCGE 53
           HY EF+R++ GE
Sbjct: 403 HYEEFVRYELGE 414



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 622 QTFINKFVXGFNSIKSSG 569
           QTF N  + GF  ++ SG
Sbjct: 118 QTFSNLNISGFGGVQESG 135


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -1

Query: 331 YL*EISSFILKVSSYSIKKEKKTAL*QSVRIDQCFPIKSIEVASKKNIV 185
           ++  + +  L +S  ++ +E KT L  + +I Q FP +   ++   N+V
Sbjct: 258 FMINVGTVTLILSCDAVLEEVKTTLLLAYKIRQVFPNEKKNISEFINVV 306


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 DRNEFLHINTTVPDLIRLHEN 416
           ++  + HI TT  + IR+H +
Sbjct: 132 EKQSYFHIATTSNEFIRVHHS 152


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 630 NCYLVKCDXXVDFNFXLFHLXPNY 701
           N Y++  D  +DF     HL  +Y
Sbjct: 154 NTYILALDGDIDFQPEALHLLVDY 177


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 630 NCYLVKCDXXVDFNFXLFHLXPNY 701
           N Y++  D  +DF     HL  +Y
Sbjct: 468 NTYILALDGDIDFQPEALHLLVDY 491


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 630 NCYLVKCDXXVDFNFXLFHLXPNY 701
           N Y++  D  +DF     HL  +Y
Sbjct: 701 NTYILALDGDIDFQPEALHLLVDY 724


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 630 NCYLVKCDXXVDFNFXLFHLXPNY 701
           N Y++  D  +DF     HL  +Y
Sbjct: 701 NTYILALDGDIDFQPEALHLLVDY 724


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,823
Number of Sequences: 336
Number of extensions: 2677
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)