Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G12
         (1245 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   8.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   8.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 770  PPPXHAXXPAPPPXH 814
            PP  H+    PPP H
Sbjct: 1796 PPSVHSSTVVPPPQH 1810


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 1098 PPPXPXXPPPRXXXXPNXKKXXXP 1169
            PPP P   PPR     N      P
Sbjct: 737  PPPHPHHQPPRNPVGTNPHDINNP 760


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +3

Query: 1098 PPPXPXXPPPRXXXXPNXKKXXXP 1169
            PPP P   PPR     N      P
Sbjct: 629  PPPHPHHQPPRNPVGTNPHDINNP 652


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.146    0.510 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,107
Number of Sequences: 336
Number of extensions: 3400
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36480155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)