Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G10
(877 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 86 3e-17
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 68 9e-12
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 60 3e-09
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 58 7e-09
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 46 3e-05
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 46 4e-05
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 44 1e-04
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 42 5e-04
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 38 0.014
SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.025
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_40493| Best HMM Match : ShTK (HMM E-Value=3.2e-09) 36 0.043
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 36 0.057
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 34 0.13
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 34 0.13
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 34 0.17
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 33 0.23
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 33 0.23
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_36610| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 31 0.92
SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24) 31 1.2
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 30 2.1
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 30 2.1
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 30 2.8
SB_43732| Best HMM Match : Rop (HMM E-Value=6.5) 29 4.9
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_25786| Best HMM Match : Rop (HMM E-Value=6.5) 29 4.9
SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34) 29 6.5
SB_43733| Best HMM Match : Rop (HMM E-Value=6.2) 29 6.5
SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61) 29 6.5
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 8.6
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 86.2 bits (204), Expect = 3e-17
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
KCP+C K+VY AEER+A G KWHK C C C K LDSTN ++ +GE+YCK C+ + F
Sbjct: 9 KCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCYGKNF 66
Score = 68.5 bits (160), Expect = 7e-12
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +3
Query: 495 EGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCKVC 659
E CPRC VY AE+ LA G+ WHK C C C K LDSTN + D +IYCK C
Sbjct: 8 EKCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNLAD-KDGEIYCKGC 61
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 68.1 bits (159), Expect = 9e-12
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 165 ADN-PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 341
ADN PKCP+CG +VY AEE K+HK CF C C+K LDSTN + H+G+ + +
Sbjct: 38 ADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASHDGKCHTTIVTQ 97
Query: 342 RK 347
R+
Sbjct: 98 RR 99
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 441 RTNGACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHKECFKCGD--CMKRLDST 614
R A L R++++ P C RC Y AE + G+ WHK CF C + C K+L+ST
Sbjct: 278 RAYNADLPTRTMSEGAPMR-CGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLEST 336
Query: 615 NCCEGS 632
NCCEG+
Sbjct: 337 NCCEGN 342
Score = 59.3 bits (137), Expect = 4e-09
Identities = 34/88 (38%), Positives = 45/88 (51%)
Frame = +3
Query: 48 FAHSSLGITALNCTRVRELDSRSDSTNRIS*ASTMPFKPADNPKCPKCGKSVYAAEERVA 227
F H +G+T L+ +D N I +T KP +P CP+C K YAAE+ +
Sbjct: 180 FIHIEVGVTVDFSFLTFRLNKMAD--NNIP-DNTCRCKP--DP-CPRCEKRAYAAEQVLG 233
Query: 228 GGLKWHKMCFKCGLCQKLLDSTNCSEHE 311
G WHK CF C C K LDST + H+
Sbjct: 234 AGFNWHKSCFNCYKCHKKLDSTTVAVHK 261
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +3
Query: 450 GACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEG 629
G + S+ A CPRCG VY AE++ +HK+CF C DC K+LDSTN
Sbjct: 27 GTASDAVSLCVADNMPKCPRCGDNVYHAEEVSMENHKFHKKCFSCKDCRKKLDSTNAASH 86
Query: 630 SDK 638
K
Sbjct: 87 DGK 89
Score = 58.0 bits (134), Expect = 9e-09
Identities = 26/57 (45%), Positives = 31/57 (54%)
Frame = +3
Query: 465 PRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSD 635
P + + P + CPRC YAAEQ+L G WHK CF C C K+LDST D
Sbjct: 207 PDNTCRCKP-DPCPRCEKRAYAAEQVLGAGFNWHKSCFNCYKCHKKLDSTTVAVHKD 262
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCG--LCQKLLDSTNCSEHEG 314
+C +C K Y AE G +WHK CF C C+K L+STNC E G
Sbjct: 296 RCGRCDKMCYHAEGISMAGKRWHKSCFACAEVRCRKKLESTNCCEGNG 343
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 59.7 bits (138), Expect = 3e-09
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3
Query: 150 MPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSE 305
M K PKCPKC K+VY+AE + G+ +HK CF C C K LDST ++
Sbjct: 2 MSSKYGGGPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
Score = 48.4 bits (110), Expect = 8e-06
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCE 626
G CP+C VY+AE G +HK CF C C K LDST +
Sbjct: 9 GPKCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 58.4 bits (135), Expect = 7e-09
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTN 617
CPRC VY AEQ A G++WHK C C C KRLDSTN
Sbjct: 5 CPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTN 43
Score = 56.8 bits (131), Expect = 2e-08
Identities = 23/45 (51%), Positives = 27/45 (60%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE 311
KCP+C K VY AE+ A G WHK C C C K LDSTN + +
Sbjct: 4 KCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKD 48
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
C CG + ++A + WH +C KC DC RLD+ C D I C+
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCR 298
Score = 38.3 bits (85), Expect = 0.008
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKVCHARKF 350
C CG + +A +WH C KC C+ LD+ C +G + C+ + R+F
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRF 305
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERV-AGGLKWHKMCFKCGLCQKLLDSTNCSEHEG-ELYCK 329
KC C +++ + E + A +H CF C C+++L + G +YCK
Sbjct: 309 KCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCK 361
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 46.0 bits (104), Expect = 4e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 162 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 341
P+ C CG+ E + A G ++H CF+C +C++ L ST+ ELYCK +
Sbjct: 5 PSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCKKDYL 63
Query: 342 RKF 350
KF
Sbjct: 64 SKF 66
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
C CG E A G+ +H CF+C C +RL + GS ++YCK
Sbjct: 11 CATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERLSTDFYARGS--ELYCK 59
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
GE C C + + GRAWH +C KC C L C D IYCK
Sbjct: 99 GERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCK 152
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC-QKLLDSTNCSEHEGELYCKVCHARKF 350
+C C + G WH C KC LC +L C +G++YCK +AR+F
Sbjct: 101 RCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQF 159
Score = 36.3 bits (80), Expect = 0.033
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 177 KCPKCGKSVYAAE-ERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGELYCKV 332
KC +CG+S++A + R A +H CF C C++ L + + +G + CK+
Sbjct: 162 KCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKL 215
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQML-ARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCKV 656
G C RCG ++A + + A+ +H CF C +C ++L + D + CK+
Sbjct: 160 GTKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKL 215
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 344
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 462 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 516
Score = 39.9 bits (89), Expect = 0.003
Identities = 49/188 (26%), Positives = 73/188 (38%), Gaps = 27/188 (14%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVA-GGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFX 353
+C CG+ + + R+ G WH+ CF+C C + + ++ + +C C+ KF
Sbjct: 401 ECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF- 459
Query: 354 XXXXXXXXXXXCLSMDTGDHLKGENAGGVRTNG-----ACLE----PRSIAKA--PPGEG 500
C S G+ L GGV NG AC RS+A A +G
Sbjct: 460 --------SKRCAS--CGEPLL---EGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDG 506
Query: 501 ---CPRCGGYVYAAE-----QMLARGRAW-------HKECFKCGDCMKRLDSTNCCEGSD 635
C C G YA + + + G + HKECF C C + L S D
Sbjct: 507 CRYCMECYGKFYAKQCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGD 566
Query: 636 KDIYCKVC 659
++ C C
Sbjct: 567 -ELLCGDC 573
Score = 35.5 bits (78), Expect = 0.057
Identities = 37/184 (20%), Positives = 58/184 (31%), Gaps = 16/184 (8%)
Frame = +3
Query: 156 FKPADNPKCPKCGKSVYAAEERVAGG--LKWHKMCFKCGLCQKLLDST-NCSEHEGELYC 326
FK + +C C + + ++ WH CF C +C++ L S + + ++ C
Sbjct: 331 FKDSYAHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILC 390
Query: 327 KVCHARKF--XXXXXXXXXXXXCLSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPGEG 500
C+ + ++ + EN G +
Sbjct: 391 NNCYVANYQKECFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFF 450
Query: 501 CP---------RCG--GYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIY 647
CP RC G +L G WHK CF C C + L S D Y
Sbjct: 451 CPGCYQSKFSKRCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASA-AFSVRDGCRY 509
Query: 648 CKVC 659
C C
Sbjct: 510 CMEC 513
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 344
+C CG+ + + G WHK CF C C + L S S +G YC C+ +
Sbjct: 50 RCASCGEPLLEGGV-LYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGK 104
Score = 34.3 bits (75), Expect = 0.13
Identities = 44/166 (26%), Positives = 63/166 (37%), Gaps = 26/166 (15%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKFXXXXXXXXXXXXCLSMDTGDHLK 419
WH+ CF+C C + + ++ + +C C+ KF C S G+ L
Sbjct: 11 WHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKF---------SKRCAS--CGEPLL 59
Query: 420 GENAGGVRTNG-----ACLE----PRSIAKA--PPGEG---CPRCGGYVYAAE-----QM 542
GGV NG AC RS+A A +G C C G YA + +
Sbjct: 60 ---EGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCRYCMECYGKFYAKQCEICLKA 116
Query: 543 LARGRAW-------HKECFKCGDCMKRLDSTNCCEGSDKDIYCKVC 659
+ G + HKECF C C + L S D ++ C C
Sbjct: 117 IVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGD-ELLCGDC 161
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 335
+C C K++ E +HK CF C C + L S EL C C
Sbjct: 109 QCEICLKAIVGGEYYTLEESNFHKECFMCSRCGRSLASEGFVREGDELLCGDC 161
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 552 GRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCKVC 659
G WH+ CF+C +C + + T+ D +C C
Sbjct: 8 GNFWHENCFRCANCGEAI-GTSGFVPKDDTFFCPGC 42
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYC 650
G C CG VY E+++A R +H+ CF+C C L + + + +C
Sbjct: 608 GTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESESFC 660
Score = 37.5 bits (83), Expect = 0.014
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 141 ASTMPFKPADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDS-TNCSEHEGE 317
A M P+ C CG+ VY E VA +H+ CF+C C L + T E E
Sbjct: 598 APMMQCMPSLGTACLICGERVYLMERLVAERRLFHRACFRCSRCNSSLRAGTYTFFPESE 657
Query: 318 LYC 326
+C
Sbjct: 658 SFC 660
>SB_40925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 30
Score = 38.3 bits (85), Expect = 0.008
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 237 KWHKMCFKCGLCQKLLDSTNCSEHE 311
K+HK CF C C+K LDSTN + H+
Sbjct: 5 KFHKKCFSCKDCRKKLDSTNAASHD 29
Score = 37.5 bits (83), Expect = 0.014
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 561 WHKECFKCGDCMKRLDSTN 617
+HK+CF C DC K+LDSTN
Sbjct: 6 FHKKCFSCKDCRKKLDSTN 24
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 37.5 bits (83), Expect = 0.014
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
C KC + + + + AG +H CF C C K L + ++ EG C+ C+ ++
Sbjct: 237 CVKCNQVIKTSSVQHAGST-YHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERY 292
Score = 36.7 bits (81), Expect = 0.025
Identities = 38/150 (25%), Positives = 57/150 (38%), Gaps = 2/150 (1%)
Frame = +3
Query: 216 ERVAGGLKWHKMCFKCGLCQKLL-DSTNCSEHEGELYCKVCHARKFXXXXXXXXXXXXCL 392
ER+ WH CF C +LL D CS+ + E+YC C C
Sbjct: 97 ERLGPDSCWHVKCFTCEEDGELLVDLIYCSK-DDEIYC--CR----HWGEKLKPRCAGCE 149
Query: 393 SMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLA-RGRAWHK 569
M+ G LK E C R I P + C C G E+ + + + +H
Sbjct: 150 EMNEGFTLKDEKL-------ICHGCRGI---NPSKVCAACNGDFAPGEKKVGYQSKTFHD 199
Query: 570 ECFKCGDCMKRLDSTNCCEGSDKDIYCKVC 659
+CF C +C + + S ++ + C C
Sbjct: 200 KCFICDECKQPIGSKQFIRRDERRL-CNNC 228
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 8/61 (13%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRL--------DSTNCCEGSDKDIYCKV 656
C +C + + A G +H ECF C C K L + N C+ ++ Y K
Sbjct: 237 CVKCNQVIKTSSVQHA-GSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYAKR 295
Query: 657 C 659
C
Sbjct: 296 C 296
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKW-HKMCFKCGLCQKLLDSTNCSEHEGELYCKVC 335
+C C + + VA K+ H+ CF C C K L +GE C C
Sbjct: 295 RCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPC 348
>SB_29553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 36.7 bits (81), Expect = 0.025
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 168 DNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTN-C--SEHEGELYC 326
++ +C CGKSV E +HK CF C +C L+ N C +H+ + YC
Sbjct: 241 ESNRCDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHD-KFYC 295
Score = 36.7 bits (81), Expect = 0.025
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRLDSTNCCEGSDKD-IYC 650
C CG V E++ +HK CF C C L+ N C D D YC
Sbjct: 245 CDSCGKSVDILERVAVENHVFHKACFVCAICNVWLNHFNYCFVPDHDKFYC 295
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 329
C CG+++ ++ +A +WH CF C C LL S +G+ YC+
Sbjct: 89 CAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLL-SLEYMGMDGKPYCE 137
Score = 35.5 bits (78), Expect = 0.057
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 447 NGACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHKECFKCGDC 593
N A P + +P C CG + ++ +LA + WH CF C C
Sbjct: 71 NNAPKAPTTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKC 119
>SB_40493| Best HMM Match : ShTK (HMM E-Value=3.2e-09)
Length = 207
Score = 35.9 bits (79), Expect = 0.043
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Frame = +3
Query: 450 GACLEPRSIAKAPPGEGCP--------RCGGYVYAAEQMLARGRAWHKECFK-CGDCMKR 602
G C + R+ A P G+GCP CG + + GR CFK CG C R
Sbjct: 110 GCCWDKRTEALGPNGKGCPYCYDVYPHSCGQFDDYCHKRGRNGRFIRYHCFKRCGACEGR 169
Query: 603 LDSTNCCEGSDKDIYCKVC 659
L ++ +Y +C
Sbjct: 170 LFHIGILRVKNEYLYINIC 188
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 35.5 bits (78), Expect = 0.057
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = +3
Query: 180 CPKCGKSVYAAEERV----AGGLK-WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHAR 344
C +C K V E V AG K WH CF C +C LL +G +YC +A
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 345 KF 350
+F
Sbjct: 369 QF 370
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 174 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
P+C C + +++ A WH+ F C C + L G+ +C C+ + +
Sbjct: 372 PRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGGQLYVARGGQPHCLECYDKYY 430
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 35.1 bits (77), Expect = 0.075
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
+H CF C C+K L +EHEG C C+ ++
Sbjct: 82 YHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRY 118
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 501 CPRCGGYVYAAEQML-ARGRAWHKECFKCGDCMKRL 605
C C + A E ++ AR A+H ECF C C KRL
Sbjct: 81 CSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRL 116
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 162 PADNPKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHE--GELYCKVC 335
P + C C + + A G WH+ C KC C L S + + CK
Sbjct: 11 PVERRLCRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRD 70
Query: 336 HARKF 350
+ R F
Sbjct: 71 YLRLF 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +3
Query: 501 CPRCGGYVYAAEQMLARGRAWHKECFKCGDCMKRL 605
C C + + A G WH+ C KC C RL
Sbjct: 17 CRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRL 51
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
WH+ C +C +C+ L S +C + +LYC+ + + F
Sbjct: 66 WHESCLQCCICRSQL-SRSCFSKDRKLYCRTDYEKVF 101
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQML-ARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
G C C + A E ++ A G +H CF C C L+ D +YCK
Sbjct: 102 GTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 156
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 329
C C K + + A G WH F C C+ L + N E +G+ YC+
Sbjct: 282 CAACNKPIIG-QVCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCE 330
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 546 ARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
A G+ WH E F C C L + N E K YC+
Sbjct: 296 ALGKTWHPEHFACVACEAPLGTQNFFERDGKP-YCE 330
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVA-GGLKWHKM--CFKCGLCQKLLDSTNCSEHEGELYC 326
C CG+ + ++A G WH CF C C K L GE+YC
Sbjct: 203 CDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPFLPKSGEIYC 254
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 180 CPKCGKSVYAAE-----ERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHA 341
C +CG+ V A R WH CF C C++LL + ++YC HA
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHA 136
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Frame = +3
Query: 468 RSIAKAPPGEGCPRCGGYVYAAEQMLARGRA-----WHKECFKCGDCMKRLDSTNCCEGS 632
+ + + G C CG V A + RA WH CF C C K L
Sbjct: 67 KQVPEMSEGYSCKECGECVTAGSMAVYASRAGQHTCWHASCFICTTC-KELLVDLIYFYK 125
Query: 633 DKDIYC 650
D +YC
Sbjct: 126 DSKVYC 131
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/55 (27%), Positives = 22/55 (40%)
Frame = +3
Query: 174 PKCPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCH 338
P+C C + ++A + A WH F C C L + + YC CH
Sbjct: 141 PRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC--CH 193
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
WH C +C C+ L + C EG+L+CK R++
Sbjct: 25 WHAQCVQCSDCKCPL-TERCFSREGKLFCKTDFYRRY 60
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 561 WHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
WH +C +C DC + T C + ++CK
Sbjct: 25 WHAQCVQCSDC--KCPLTERCFSREGKLFCK 53
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 32.7 bits (71), Expect = 0.40
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 180 CPKCGKSVYAAEERVAGGLKWHKMCFKCGLCQK 278
C CGK + A ER+A ++ HK F C +C+K
Sbjct: 106 CGNCGKDM-ATPERLAKHMETHKKKFGCDICEK 137
>SB_36610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 546 ARGRAWHKECFKCGDCMKRLDSTNCCEGSDK 638
+RG+ W E ++CG KRL +C + DK
Sbjct: 27 SRGQTWRNELYRCGGRSKRLRLYDCKKKKDK 57
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 31.5 bits (68), Expect = 0.92
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Frame = +3
Query: 444 TNGACLEPRSIAKAPPGEGCPRC-GGYVYAAEQM-------LARGRAWHKECF-KCGDCM 596
T G C + +IA+ P G+GCP C Y + +Q GR CF CG C
Sbjct: 149 TYGCCWD-NTIAEGPNGQGCPACYDRYPHTCKQFDDYCIKPGRNGRFIRYHCFNSCGRCA 207
Query: 597 KRLD 608
RL+
Sbjct: 208 IRLE 211
>SB_43770| Best HMM Match : PET (HMM E-Value=8.8e-24)
Length = 251
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/87 (29%), Positives = 36/87 (41%)
Frame = +3
Query: 390 LSMDTGDHLKGENAGGVRTNGACLEPRSIAKAPPGEGCPRCGGYVYAAEQMLARGRAWHK 569
++MD + + A GV AC+ S K G P G AE+ L WH
Sbjct: 164 MAMDDFCEKRIKTALGVGAVRACMAQPSTCKRCNGPVNP--GDMALFAER-LGPDSCWHV 220
Query: 570 ECFKCGDCMKRLDSTNCCEGSDKDIYC 650
+CF C + + L C D +IYC
Sbjct: 221 KCFTCEEDGELLVDLIYC-SKDAEIYC 246
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 180 CPKCGKSVYAAEERV--AGGLKWHKMCFKCGLCQKLLDSTNCSEHEGELYCK 329
C CG+ V E+RV A G WH F C C+K E +G YC+
Sbjct: 81 CFCCGRPV---EDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCE 129
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELY 323
WH CF+C +C L T ++ G Y
Sbjct: 33 WHPDCFRCEICNDCLADTGFVKNAGSTY 60
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 492 GEGCPRCGGYVYAAEQML-ARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCK 653
G C C + A E ++ A G +H CF C C L+ D +YCK
Sbjct: 4 GTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCK 58
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 546 ARGRAWHKECFKCGDCMKRLDSTNCCEGSDKDIYCKVC 659
A R +H E F C C+K+L+ E +DK YC C
Sbjct: 39 AMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKP-YCHPC 75
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +3
Query: 237 KWHKMCFKCGLCQKLLDSTNCSEHEGELYCKVCHARKF 350
K+H F C C K L+ E + YC C + F
Sbjct: 43 KFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLF 80
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 29.9 bits (64), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 450 GACLEPRSIAKAPPGEGCPRC 512
G C + ++ A+ P GEGCP C
Sbjct: 1091 GCCWDKKTRARGPGGEGCPFC 1111
>SB_43732| Best HMM Match : Rop (HMM E-Value=6.5)
Length = 294
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 36 KIW-NFAHSSLGITALNCTRVRELDSRSDSTNRIS*ASTMP 155
K W F + NC R+R + S D+T RI A+T P
Sbjct: 123 KTWCQFTKKMWSVQIRNCGRIRTVHSNIDTTRRILNATTPP 163
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 240 WHKMCFKCGLCQKLLDSTNCSEHEGELYC 326
WHK CFKC C L+ ++ YC
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYC 241
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 561 WHKECFKCGDCMKRLDSTNCCEGSDKDIYC 650
WHK CFKC C L + +G K YC
Sbjct: 213 WHKGCFKCESCGMTL-NMKTYKGYQKLPYC 241
>SB_25786| Best HMM Match : Rop (HMM E-Value=6.5)
Length = 294
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 36 KIW-NFAHSSLGITALNCTRVRELDSRSDSTNRIS*ASTMP 155
K W F + NC R+R + S D+T RI A+T P
Sbjct: 123 KTWCQFTKKMWSVQIRNCGRIRTVHSNIDTTRRILNATTPP 163
>SB_59568| Best HMM Match : TPP_enzyme_C (HMM E-Value=3.6e-34)
Length = 521
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 336 GTLCSTVHPRALSSWLSPAIFGT 268
GT + PRA SWL P FGT
Sbjct: 362 GTAAYILRPRAPLSWLDPGAFGT 384
>SB_43733| Best HMM Match : Rop (HMM E-Value=6.2)
Length = 412
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = +3
Query: 36 KIW-NFAHSSLGITALNCTRVRELDSRSDSTNRIS*ASTMPFKPADNPKCPKCGKSVYAA 212
K W F S + NC R+R + S D+T R+ +T +C +
Sbjct: 123 KTWCQFTKRSWSVQIRNCGRIRTVHSNIDTTRRVLNVTTPRVSSYVFQQCNILRGAFVIR 182
Query: 213 EERVAGGLKWHKMCFKCGLCQKLLDS 290
+E+V W M + G+ L S
Sbjct: 183 KEKVKTINNWRSMYGELGILDFFLRS 208
>SB_24229| Best HMM Match : Fukutin-related (HMM E-Value=0.61)
Length = 604
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = +3
Query: 36 KIW-NFAHSSLGITALNCTRVRELDSRSDSTNRIS*ASTMPFKPADNPKCPKCGKSVYAA 212
K W F S + NC R+R + S D+T R+ +T +C +
Sbjct: 367 KTWCQFTKRSWSVQIRNCGRIRTVHSNIDTTRRVLNVTTPRVSSYVFQQCNILRGAFVIR 426
Query: 213 EERVAGGLKWHKMCFKCGLCQKLLDS 290
+E+V W M + G+ L S
Sbjct: 427 KEKVKTINNWRSMYGELGILDFFLRS 452
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 177 KCPKCGKSVYAAEERVAGGLKWHKMCFKCGLC 272
KCP C K E+R + HK ++CG C
Sbjct: 188 KCPHCKKVFSDKEKRKDHYISAHKKEYRCGKC 219
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 719 LQHTSAFSVTISLRTKLLAIA-NFAVNIFVGTFATVGGVQPFHAVATFEALLVPRPTASQ 543
++ T+ V +++ ++ +A + V+I V V P H T E LVPR T
Sbjct: 97 MEDTTHMEVVVAVAMVVVMVAADIEVDIVEVVMVVVAMVDPLHQGTTTETDLVPRETTVG 156
Query: 542 H 540
H
Sbjct: 157 H 157
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,407,543
Number of Sequences: 59808
Number of extensions: 555217
Number of successful extensions: 2279
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2273
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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