Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G08
         (1315 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.30 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.52 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   6.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   6.5  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   6.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
            protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 0.30
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 1090 GXXXGRGGXXXGXXRXXXXGGXXGGGG 1170
            G   GRGG   G  R    GG  GGGG
Sbjct: 67   GGRGGRGGRGGGRGRGRGRGGRDGGGG 93


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.52
 Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 5/107 (4%)
 Frame = -3

Query: 1151 PPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPX---TXLXXXPPRPRXXXPXPP-- 987
            PP    +      P RP      G    R P    P    T     PPRP    P PP  
Sbjct: 165  PPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGV 224

Query: 986  XXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXPXRXAXPXP 846
                 P   P           P P S      P     P     P P
Sbjct: 225  PMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNP 271


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 21/85 (24%), Positives = 27/85 (31%)
 Frame = -1

Query: 1147 RVRXPAGXXXVPPXDPXXXXXGXXXSXAPPXHXXPSPXXXXILRXPAAXPPXXPALXPXP 968
            ++R PAG   +P   P            PP    PSP     L  PA   P  P L    
Sbjct: 566  QLRFPAGFPNLPNAQPPPAPP-----PPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFG 620

Query: 967  PXXPKXGXSLXXXLTPPQXXXXPLP 893
               P     +   +  P     P+P
Sbjct: 621  GAAPPVTILVPYPIIIPLPLPIPVP 645



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = -3

Query: 1166 PPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPP 1056
            PPP  PP       P   PP P      GG     PP
Sbjct: 581  PPPAPPPPP-----PMGPPPSPLAGGPLGGPAGSRPP 612


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 83  GGAGDXDXGRGXXXXAAXVXXSXXXGGGGXG 175
           GG G    G G    +  +  S   GGGG G
Sbjct: 653 GGGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.8 bits (44), Expect(2) = 6.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 1172 SPPPPXXPP 1146
            SPPPP  PP
Sbjct: 782  SPPPPPPPP 790



 Score = 20.6 bits (41), Expect(2) = 6.5
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 1169 PPPPXXPPXXXS 1134
            PPPP  PP   S
Sbjct: 784  PPPPPPPPSSLS 795


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,046
Number of Sequences: 2352
Number of extensions: 4734
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 151645137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)