Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G08
(1315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.005
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.005
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.005
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 37 0.027
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 36 0.048
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.11
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.11
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.59
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.59
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.59
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.59
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.78
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.78
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.78
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 1.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 1.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 3.2
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 30 4.2
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 30 4.2
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 29 7.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 7.3
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 9.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 9.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/98 (28%), Positives = 30/98 (30%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP PP P PP P GG PP P + PP P
Sbjct: 710 TGGPPPPPGLPPITGG---PPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPP--- 761
Query: 1001 XPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXP 888
P PP P P P P +P P
Sbjct: 762 -PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Frame = -2
Query: 1152 PAXXXXPXAPXXXPPXT---PXXPXXGXXXPXH--PPXTXXXHRLXXXSSAXPXPXPXPX 988
P P P PP T P P G P PP L S P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPP 765
Query: 987 XXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXPXRXXXXTD 841
PPP P P P P+ P P + D
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV-IPDYLPPKKVPKVD 813
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXP 1020
P T PPPP P PP P GG PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 1019 PRPRXXXPXPP 987
P P PP
Sbjct: 777 PGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/98 (28%), Positives = 30/98 (30%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP PP P PP P GG PP P + PP P
Sbjct: 710 TGGPPPPPGLPPITGG---PPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPP--- 761
Query: 1001 XPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXP 888
P PP P P P P +P P
Sbjct: 762 -PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Frame = -2
Query: 1152 PAXXXXPXAPXXXPPXT---PXXPXXGXXXPXH--PPXTXXXHRLXXXSSAXPXPXPXPX 988
P P P PP T P P G P PP L S P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPP 765
Query: 987 XXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXPXRXXXXTD 841
PPP P P P P+ P P + D
Sbjct: 766 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV-IPDYLPPKKVPKVD 813
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXP 1020
P T PPPP P PP P GG PP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 1019 PRPRXXXPXPP 987
P P PP
Sbjct: 777 PGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.5 bits (88), Expect = 0.005
Identities = 28/98 (28%), Positives = 30/98 (30%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP PP P PP P GG PP P + PP P
Sbjct: 293 TGGPPPPPGLPPITGG---PPPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPP--- 344
Query: 1001 XPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXP 888
P PP P P P P +P P
Sbjct: 345 -PPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 30.3 bits (65), Expect = 3.2
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Frame = -2
Query: 1152 PAXXXXPXAPXXXPPXT---PXXPXXGXXXPXH--PPXTXXXHRLXXXSSAXPXPXPXPX 988
P P P PP T P P G P PP L S P P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP-PPPPPP 348
Query: 987 XXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXPXRXXXXTD 841
PPP P P P P+ P P + D
Sbjct: 349 GGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPV-IPDYLPPKKVPKVD 396
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXP 1020
P T PPPP P PP P GG PP P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 1019 PRPRXXXPXPP 987
P P PP
Sbjct: 360 PGGFKGGPPPP 370
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 37.1 bits (82), Expect = 0.027
Identities = 26/84 (30%), Positives = 26/84 (30%), Gaps = 2/84 (2%)
Frame = +1
Query: 958 GXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGG--VRXXXPPXXGXXXGRGGXXXGXX 1131
G G GG G G GG G GG PP G G GG G
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
Query: 1132 RXXXXGGXXGGGGEXSVVXXXXGC 1203
GG GGGG GC
Sbjct: 133 CGGGGGGGCGGGGGGGCGGGGGGC 156
Score = 32.3 bits (70), Expect = 0.78
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = +1
Query: 988 GGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXX-GXXXGRGGXXXGXXRXXXXGGXXGG 1164
GG G G GG G GG PP G G GG G GG G
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCG 86
Query: 1165 GGEXSVVXXXXGC 1203
GG GC
Sbjct: 87 GGGGGCGGGGGGC 99
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 36.3 bits (80), Expect = 0.048
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = -3
Query: 1172 SPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPX 993
SPPPP PP R P PP P P R PP P P P P
Sbjct: 137 SPPPP--PPPRVPRTPPPRSPP-PRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
Query: 992 PP 987
PP
Sbjct: 194 PP 195
Score = 32.3 bits (70), Expect = 0.78
Identities = 32/109 (29%), Positives = 33/109 (30%)
Frame = -3
Query: 1178 DXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXX 999
+ SPPPP PP SR PP P RTPP P PPR R
Sbjct: 119 EASPPPP--PPPRKSRAGGSSPPPPPPP------RVPRTPPPRSP-------PPR-RPPM 162
Query: 998 PXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXPXRXAXP 852
P P P T P P P S R R P
Sbjct: 163 TPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDRRALRARRP 211
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/75 (25%), Positives = 21/75 (28%), Gaps = 1/75 (1%)
Frame = -2
Query: 1176 PLPXPTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXHPPXT-XXXHRLXXXSSAXPXPX 1000
P P P + P PP P P P PP T R + P P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 999 PXPXXXSRXXXXPPP 955
P PPP
Sbjct: 182 NPPRTPPSPIPPPPP 196
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 35.1 bits (77), Expect = 0.11
Identities = 23/72 (31%), Positives = 23/72 (31%)
Frame = +1
Query: 955 WGXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXR 1134
WG G G G G GG G GG G GRGG G
Sbjct: 64 WGGGRGGGWGNNGGGGNWGGNGGGGN---GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Query: 1135 XXXXGGXXGGGG 1170
GG GGGG
Sbjct: 121 RGGGGGGRGGGG 132
Score = 34.3 bits (75), Expect = 0.19
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 870 GXSXXGWXGRGXXXXWGGVSXXXXXXPXLGXXGGXGXXAGXXGGXAAGXRRXXXQXGXGX 1049
G GW G WGG G GG G G GG G G G
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGG 125
Query: 1050 XXXGG 1064
GG
Sbjct: 126 GGRGG 130
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +1
Query: 955 WGXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXR 1134
WG GG GRGG G GG G G GG
Sbjct: 48 WGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
Query: 1135 XXXXGGXXGGGG 1170
GG GGGG
Sbjct: 108 GGGRGGGGGGGG 119
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPPP P P P P G P P PP PR P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 989 P 987
P
Sbjct: 300 P 300
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/96 (25%), Positives = 27/96 (28%)
Frame = -1
Query: 1180 PTXPXPHXXXRRVRXPAGXXXVPPXDPXXXXXGXXXSXAPPXHXXPSPXXXXILRXPAAX 1001
P P + P PP P + +PP SP PA
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGG 287
Query: 1000 PPXXPALXPXPPXXPKXGXSLXXXLTPPQXXXXPLP 893
P P PP P G L PPQ P P
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/92 (27%), Positives = 28/92 (30%)
Frame = -3
Query: 1172 SPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPX 993
SPPPP P PP P PP P T PP P P
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP---PPTG--SPPPPPAGGSPP 290
Query: 992 PPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSP 897
PP + P P + P P + SP
Sbjct: 291 PPRAGS-PPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP R PP P P G P PP PR
Sbjct: 277 TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 336
Query: 1001 XPXP 990
P
Sbjct: 337 RQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPPP P P P P G P P PP PR P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 989 P 987
P
Sbjct: 321 P 321
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/96 (25%), Positives = 27/96 (28%)
Frame = -1
Query: 1180 PTXPXPHXXXRRVRXPAGXXXVPPXDPXXXXXGXXXSXAPPXHXXPSPXXXXILRXPAAX 1001
P P + P PP P + +PP SP PA
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGG 308
Query: 1000 PPXXPALXPXPPXXPKXGXSLXXXLTPPQXXXXPLP 893
P P PP P G L PPQ P P
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/92 (27%), Positives = 28/92 (30%)
Frame = -3
Query: 1172 SPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPX 993
SPPPP P PP P PP P T PP P P
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP---PPTG--SPPPPPAGGSPP 311
Query: 992 PPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSP 897
PP + P P + P P + SP
Sbjct: 312 PPRAGS-PPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP R PP P P G P PP PR
Sbjct: 298 TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 357
Query: 1001 XPXP 990
P
Sbjct: 358 RQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPPP P P P P G P P PP PR P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 989 P 987
P
Sbjct: 306 P 306
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/96 (25%), Positives = 27/96 (28%)
Frame = -1
Query: 1180 PTXPXPHXXXRRVRXPAGXXXVPPXDPXXXXXGXXXSXAPPXHXXPSPXXXXILRXPAAX 1001
P P + P PP P + +PP SP PA
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-----PAGG 293
Query: 1000 PPXXPALXPXPPXXPKXGXSLXXXLTPPQXXXXPLP 893
P P PP P G L PPQ P P
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/92 (27%), Positives = 28/92 (30%)
Frame = -3
Query: 1172 SPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPX 993
SPPPP P PP P PP P T PP P P
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP---PPTG--SPPPPPAGGSPP 296
Query: 992 PPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSP 897
PP + P P + P P + SP
Sbjct: 297 PPRAGS-PPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/64 (26%), Positives = 17/64 (26%)
Frame = -3
Query: 1181 TDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXX 1002
T PPPP R PP P P G P PP PR
Sbjct: 283 TGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQK 342
Query: 1001 XPXP 990
P
Sbjct: 343 RQAP 346
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.59
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPPP PP PP P G PP P PP P P P
Sbjct: 317 PPPP--PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Query: 989 P 987
P
Sbjct: 375 P 375
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/112 (24%), Positives = 30/112 (26%), Gaps = 5/112 (4%)
Frame = -3
Query: 1235 PRXXXTXXXTXXPXXXXTTDXSPPPPXXPP-----XXXSRXXPXXXPPRPXXXPXXGGXX 1071
P T T P ++ PPPP PP P PP P GG
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 1070 XRTPPXXXPXTXLXXXPPRPRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXP 915
PP + PP PR P P P P P
Sbjct: 335 PPPPPGMRYPGGMPPPPP-PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/104 (24%), Positives = 26/104 (25%)
Frame = -2
Query: 1176 PLPXPTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXHPPXTXXXHRLXXXSSAXPXPXP 997
P P P+ P P P P P P G P PP P P P
Sbjct: 264 PPPPPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 996 XPXXXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXP 865
PPP P P P P P P
Sbjct: 323 SRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYP 364
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/105 (22%), Positives = 27/105 (25%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXP 1020
P T +P PP P P P R P G PP + P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 1019 PRPRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPS 885
P P P P P +P P P PS
Sbjct: 335 PPP---PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Score = 29.1 bits (62), Expect = 7.3
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 1/107 (0%)
Frame = -3
Query: 1163 PPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXL-XXXPPRPRXXXPXPP 987
PP PP P P P P G R PP P + + PP P P PP
Sbjct: 261 PPVPPP-------PPSVTPMPPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPP 311
Query: 986 XXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXPXRXAXPXP 846
P P P P P R P P P
Sbjct: 312 GMPGMPPPPPPSRFG------PPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.59
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPPP PP PP P G PP P PP P P P
Sbjct: 327 PPPP--PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Query: 989 P 987
P
Sbjct: 385 P 385
Score = 31.5 bits (68), Expect = 1.4
Identities = 27/112 (24%), Positives = 30/112 (26%), Gaps = 5/112 (4%)
Frame = -3
Query: 1235 PRXXXTXXXTXXPXXXXTTDXSPPPPXXPP-----XXXSRXXPXXXPPRPXXXPXXGGXX 1071
P T T P ++ PPPP PP P PP P GG
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 1070 XRTPPXXXPXTXLXXXPPRPRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXP 915
PP + PP PR P P P P P
Sbjct: 345 PPPPPGMRYPGGMPPPPP-PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/104 (24%), Positives = 26/104 (25%)
Frame = -2
Query: 1176 PLPXPTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXHPPXTXXXHRLXXXSSAXPXPXP 997
P P P+ P P P P P P G P PP P P P
Sbjct: 274 PPPPPSVTPMPPPMPPTP-GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 996 XPXXXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXP 865
PPP P P P P P P
Sbjct: 333 SRFGPPGMGGMPPPPPPGMRYPGGMPP--PPPPRYPSAGPGMYP 374
Score = 30.3 bits (65), Expect = 3.2
Identities = 24/105 (22%), Positives = 27/105 (25%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXP 1020
P T +P PP P P P R P G PP + P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 1019 PRPRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPS 885
P P P P P +P P P PS
Sbjct: 345 PPP---PPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Score = 29.1 bits (62), Expect = 7.3
Identities = 28/107 (26%), Positives = 30/107 (28%), Gaps = 1/107 (0%)
Frame = -3
Query: 1163 PPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXL-XXXPPRPRXXXPXPP 987
PP PP P P P P G R PP P + + PP P P PP
Sbjct: 271 PPVPPP-------PPSVTPMPPPMPPTPGMTPRPPP--PPSSGMWPPPPPPPPGRTPGPP 321
Query: 986 XXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXPXRXAXPXP 846
P P P P P R P P P
Sbjct: 322 GMPGMPPPPPPSRFG------PPGMGGMPPPPPPGMRYPGGMPPPPP 362
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = -3
Query: 1172 SPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRP 1011
+PPPP P + P PP P P G + PP PP P
Sbjct: 706 APPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPP 759
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.59
Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 7/85 (8%)
Frame = -1
Query: 1180 PTXPXPHXXXRRVRX-------PAGXXXVPPXDPXXXXXGXXXSXAPPXHXXPSPXXXXI 1022
P P PH RR P +PP P + P P P +
Sbjct: 513 PPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNL 572
Query: 1021 LRXPAAXPPXXPALXPXPPXXPKXG 947
P PP P L PP P G
Sbjct: 573 SGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.78
Identities = 24/82 (29%), Positives = 24/82 (29%)
Frame = +1
Query: 958 GXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXRX 1137
G G GG G G GG G GG G G GG G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS--GGCGGGGGGGCGGGGGG 169
Query: 1138 XXXGGXXGGGGEXSVVXXXXGC 1203
GG GGGG GC
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGC 191
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = +1
Query: 958 GXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXRX 1137
G G GG GG G GG P G G GG G
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
Query: 1138 XXXGGXXGGGGEXSVVXXXXGC 1203
GG GGG GC
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGC 117
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.78
Identities = 24/82 (29%), Positives = 24/82 (29%)
Frame = +1
Query: 958 GXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXRX 1137
G G GG G G GG G GG G G GG G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSS--GGCGGGGGGGCGGGGGG 169
Query: 1138 XXXGGXXGGGGEXSVVXXXXGC 1203
GG GGGG GC
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGC 191
Score = 29.1 bits (62), Expect = 7.3
Identities = 22/82 (26%), Positives = 22/82 (26%)
Frame = +1
Query: 958 GXXXGXAXXXGGXGXXXRGRGGXXXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXRX 1137
G G GG GG G GG P G G GG G
Sbjct: 36 GGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGG 95
Query: 1138 XXXGGXXGGGGEXSVVXXXXGC 1203
GG GGG GC
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGC 117
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.78
Identities = 30/133 (22%), Positives = 34/133 (25%), Gaps = 2/133 (1%)
Frame = -2
Query: 1164 PTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXH--PPXTXXXHRLXXXSSAXPXPXPXP 991
P PA P P PP P P PP + + P P P P
Sbjct: 15 PESAPAATT-PQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYP 73
Query: 990 XXXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXPXRXXXXTDAXXAPXXASX 811
+ PP P P P P +P P P AP
Sbjct: 74 QH-AVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQP 132
Query: 810 RXRPPXXHXXXTP 772
PP H P
Sbjct: 133 PPPPPPPHYPPPP 145
Score = 31.1 bits (67), Expect = 1.8
Identities = 26/103 (25%), Positives = 28/103 (27%)
Frame = -2
Query: 1173 LPXPTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXHPPXTXXXHRLXXXSSAXPXPXPX 994
+P P PA P PP P P PP H A P P P
Sbjct: 62 VPAPAPPPAPYPQHAVPAPAPPLASY-PQNAVPVPAPPPAPYPQH-------AVPAPAPP 113
Query: 993 PXXXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXP 865
P + P P P P P P P P P
Sbjct: 114 PAPYPQ-HAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAP 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 1.0
Identities = 20/67 (29%), Positives = 20/67 (29%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRPRXXXPXP 990
PPP PP P PP P P PP P PP P P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP-------PPPPMCPPPPP 79
Query: 989 PXXXAXP 969
P P
Sbjct: 80 PMPSYSP 86
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRP 1011
PPPP PP P PP P G PP + PP P
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 3.2
Identities = 27/107 (25%), Positives = 28/107 (26%)
Frame = +1
Query: 847 GXGXAXRXGXRXXDGXXGEXXXFGXG*VXXXXXXXXWGXXXGXAXXXGGXGXXXRGRGGX 1026
G G G G G G G G G GG G G GG
Sbjct: 98 GYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGG 157
Query: 1027 XXKXVXGXXXGGVRXXXPPXXGXXXGRGGXXXGXXRXXXXGGXXGGG 1167
G GG+ G GG G GG GGG
Sbjct: 158 GGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGG 204
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical protein
F25H8.5c protein.
Length = 732
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/108 (24%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRP---XXXPXXGGXXXRTPPXXXP-----XTXLXXXPPR 1014
P P PP + P PP P P PP P T PR
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPR 147
Query: 1013 PRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXP 870
P PP PQ + P P P P R P
Sbjct: 148 GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQP 195
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical protein
F25H8.5b protein.
Length = 369
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/108 (24%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRP---XXXPXXGGXXXRTPPXXXP-----XTXLXXXPPR 1014
P P PP + P PP P P PP P T PR
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPR 147
Query: 1013 PRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXP 870
P PP PQ + P P P P R P
Sbjct: 148 GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQP 195
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical protein
F25H8.5a protein.
Length = 780
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/108 (24%), Positives = 28/108 (25%), Gaps = 8/108 (7%)
Frame = -3
Query: 1169 PPPPXXPPXXXSRXXPXXXPPRP---XXXPXXGGXXXRTPPXXXP-----XTXLXXXPPR 1014
P P PP + P PP P P PP P T PR
Sbjct: 88 PQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCLPSPR 147
Query: 1013 PRXXXPXPPXXXAXPXXXPQXXXXXXXXTHPXPXSXXSPXXPSXXRXP 870
P PP PQ + P P P P R P
Sbjct: 148 GYENQPQPPQPQQQQYPQPQPQRGGCTYSQPQPQPQQQPQPPCYQRQP 195
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 29.9 bits (64), Expect = 4.2
Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 3/108 (2%)
Frame = -2
Query: 1179 RPLPXPTXXPAXXXXPXAPXXXPPXTPXXPXXGXXXPXHPPXTXXXHRLXXXSSAXPXPX 1000
+P P P P P P P P P P + P P
Sbjct: 178 KPKPDPKPKPKPKPKPK-PKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPN 236
Query: 999 PXPXXXSRXXXXPPPXXXXXXXXXS---PXPKXXPLPXXPIPXPXXXP 865
P P + P P S P PK P P P P P P
Sbjct: 237 PKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKP-KPNPKPEPNP 283
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/70 (27%), Positives = 21/70 (30%)
Frame = -2
Query: 1278 APTAXSAHPPDLXXPXXPXHPXTHXTXSXXXHXRPLPXPTXXPAXXXXPXAPXXXPPXTP 1099
APT +A P L P P + P P PA AP PP P
Sbjct: 59 APTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAPVLAAPAPFLAPPVPP 118
Query: 1098 XXPXXGXXXP 1069
P P
Sbjct: 119 VAPIVSAFAP 128
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 7.3
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -3
Query: 1184 TTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXLXXXPPRP 1011
T PP P PP R P P P G PP P PP P
Sbjct: 107 TCQVGPPGPPGPPGRDGRPGAPGRPGNP-GPPGRDGALLPGPPPKPPCQKCPPGPPGP 163
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical protein
T26C11.2 protein.
Length = 343
Score = 28.7 bits (61), Expect = 9.6
Identities = 26/108 (24%), Positives = 29/108 (26%), Gaps = 3/108 (2%)
Frame = -2
Query: 1179 RPLPXPTXXPAXXXXPXA---PXXXPPXTPXXPXXGXXXPXHPPXTXXXHRLXXXSSAXP 1009
+P P P P P P P P P H P L P
Sbjct: 183 KPKPMPKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPIP 242
Query: 1008 XPXPXPXXXSRXXXXPPPXXXXXXXXXSPXPKXXPLPXXPIPXPXXXP 865
P P P + P P P PK L P+P P P
Sbjct: 243 KPMPFPKPMPKPKPKPKP-------MPKPKPK-LKLKPKPMPFPKPKP 282
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/83 (25%), Positives = 22/83 (26%), Gaps = 1/83 (1%)
Frame = -2
Query: 1134 PXAPXXXPPXTPXXPXXGXXXPXH-PPXTXXXHRLXXXSSAXPXPXPXPXXXSRXXXXPP 958
P P PP G PP T P P P P S+ PP
Sbjct: 441 PPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP 500
Query: 957 PXXXXXXXXXSPXPKXXPLPXXP 889
P P P P P P
Sbjct: 501 PLPPIATPSSVPPPPPPPPPPPP 523
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXXPPXXXSRXXPXXXPPRPXXXP 1089
P + PPPP PP P PP P P
Sbjct: 487 PQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.7 bits (61), Expect = 9.6
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = -3
Query: 1199 PXXXXTTDXSPPPPXX----PPXXXSRXXPXXXPPRPXXXPXXGGXXXRTPPXXXPXTXL 1032
P T +PPP PP + P PP P G PP P
Sbjct: 104 PQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYP---- 159
Query: 1031 XXXPPRPRXXXPXPP 987
PPRP+ PP
Sbjct: 160 --GPPRPQAPAAPPP 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,778,456
Number of Sequences: 27780
Number of extensions: 161476
Number of successful extensions: 1365
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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