Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G07
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.088
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.088
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 35 0.088
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 3.3
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 3.3
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 5.8
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 130 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 288
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 34.7 bits (76), Expect = 0.088
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +1
Query: 130 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 288
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 34.7 bits (76), Expect = 0.088
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 118 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTLPKADLTSSL 288
LC+LW L T T TT T+ + TTT + T T T T T+P T+++
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 289 P 291
P
Sbjct: 239 P 239
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP 264
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS-SLPLSLV 303
T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 91 EILHDFPSSLCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLP-K 267
E++ D P++ T+ T + T T+ PK TT ETAT S+T +T P
Sbjct: 371 EVISDVPTTTVQTSTTVPTTPSKTTATTTTT---PKPTT-TETATTSSSTTTVTTQKPTT 426
Query: 268 ADLTSSLP 291
T++LP
Sbjct: 427 VTSTTTLP 434
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +1
Query: 148 TATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTLPKADLTSSLP 291
T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 136 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 288
T ++ T+ TT ++ +P TTT E AT T T LPK L L
Sbjct: 118 TTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQLAGRL 167
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 142 KETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSK 321
KET T+L T PKTTT++ ++T ST +T +A T++ P + V +K
Sbjct: 442 KETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTK 492
Query: 322 E 324
+
Sbjct: 493 K 493
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 109 PSSLCWLWPTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTLPKADLTS 282
P+++ PT+ T T ++TT T + +P T + T TN ST V T+ T
Sbjct: 353 PNTVVTSSPTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTV 412
Query: 283 SLPLSLVL 306
S V+
Sbjct: 413 MTSRSTVI 420
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,890,254
Number of Sequences: 27780
Number of extensions: 323846
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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