Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_G06
(896 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 113 8e-25
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 113 8e-25
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 113 8e-25
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 113 8e-25
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 113 8e-25
BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing wit... 32 3.2
BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein. 32 3.2
AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens ... 32 3.2
AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein. 32 3.2
BC030524-1|AAH30524.1| 211|Homo sapiens CLDN19 protein protein. 31 5.7
AK096063-1|BAC04691.1| 224|Homo sapiens protein ( Homo sapiens ... 31 5.7
AF497644-1|AAQ07256.1| 211|Homo sapiens claudin-19 protein. 31 5.7
BC011672-1|AAH11672.1| 461|Homo sapiens GPRIN2 protein protein. 30 9.9
AL645529-1|CAI14956.1| 458|Homo sapiens G protein regulated ind... 30 9.9
AB011086-1|BAA25440.2| 483|Homo sapiens KIAA0514 protein protein. 30 9.9
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3
Query: 189 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 368
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 369 HGQVIYTRATKGDDPVA 419
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3
Query: 189 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 368
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 369 HGQVIYTRATKGDDPVA 419
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3
Query: 189 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 368
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 369 HGQVIYTRATKGDDPVA 419
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3
Query: 189 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 368
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 369 HGQVIYTRATKGDDPVA 419
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = +3
Query: 189 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 368
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 369 HGQVIYTRATKGDDPVA 419
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC043504-1|AAH43504.1| 822|Homo sapiens IQ motif containing with
AAA domain protein.
Length = 822
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 71 KKDAKASAKQPQKTQKKKEGSRWRQSQEEE 160
KK K KQP+K +K+K+G++ + +E+E
Sbjct: 353 KKKKKKKEKQPKKAKKQKKGTKEKNKEEDE 382
>BC028699-1|AAH28699.1| 679|Homo sapiens IQCA protein protein.
Length = 679
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 71 KKDAKASAKQPQKTQKKKEGSRWRQSQEEE 160
KK K KQP+K +K+K+G++ + +E+E
Sbjct: 353 KKKKKKKEKQPKKAKKQKKGTKEKNKEEDE 382
>AK054711-1|BAB70798.1| 542|Homo sapiens protein ( Homo sapiens
cDNA FLJ30149 fis, clone BRACE2000280, weakly similar to
MNN4 PROTEIN. ).
Length = 542
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 71 KKDAKASAKQPQKTQKKKEGSRWRQSQEEE 160
KK K KQP+K +K+K+G++ + +E+E
Sbjct: 360 KKKKKKKEKQPKKAKKQKKGTKEKNKEEDE 389
>AC093915-1|AAY24064.1| 383|Homo sapiens unknown protein.
Length = 383
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 71 KKDAKASAKQPQKTQKKKEGSRWRQSQEEE 160
KK K KQP+K +K+K+G++ + +E+E
Sbjct: 113 KKKKKKKEKQPKKAKKQKKGTKEKNKEEDE 142
>BC030524-1|AAH30524.1| 211|Homo sapiens CLDN19 protein protein.
Length = 211
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 176 FSFGPLLLLGFAATGILPSSSVFFEAVWPKPSRPS 72
+ FGP L +G+A+ G+ F P+P RP+
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERPN 193
>AK096063-1|BAC04691.1| 224|Homo sapiens protein ( Homo sapiens
cDNA FLJ38744 fis, clone KIDNE2012188, highly similar to
Mus musculus claudin-19 mRNA. ).
Length = 224
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 176 FSFGPLLLLGFAATGILPSSSVFFEAVWPKPSRPS 72
+ FGP L +G+A+ G+ F P+P RP+
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERPN 193
>AF497644-1|AAQ07256.1| 211|Homo sapiens claudin-19 protein.
Length = 211
Score = 31.1 bits (67), Expect = 5.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 176 FSFGPLLLLGFAATGILPSSSVFFEAVWPKPSRPS 72
+ FGP L +G+A+ G+ F P+P RP+
Sbjct: 159 YEFGPALFVGWASAGLAVLGGSFLCCTCPEPERPN 193
>BC011672-1|AAH11672.1| 461|Homo sapiens GPRIN2 protein protein.
Length = 461
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 85 GFGQTASKNTEEEGRIPVAAKPRRRSGPKEK 177
G T + EEEG P + KP R SGPK +
Sbjct: 53 GEASTRPQAPEEEGNPPESMKPARASGPKAR 83
>AL645529-1|CAI14956.1| 458|Homo sapiens G protein regulated
inducer of neurite outgrowth 2 protein.
Length = 458
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 85 GFGQTASKNTEEEGRIPVAAKPRRRSGPKEK 177
G T + EEEG P + KP R SGPK +
Sbjct: 53 GEASTRPQAPEEEGNPPESMKPARASGPKAR 83
>AB011086-1|BAA25440.2| 483|Homo sapiens KIAA0514 protein protein.
Length = 483
Score = 30.3 bits (65), Expect = 9.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 85 GFGQTASKNTEEEGRIPVAAKPRRRSGPKEK 177
G T + EEEG P + KP R SGPK +
Sbjct: 75 GEASTRPQAPEEEGNPPESMKPARASGPKAR 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,410,821
Number of Sequences: 237096
Number of extensions: 2216012
Number of successful extensions: 6924
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6783
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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