SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_G02
         (870 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.70 
SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.93 
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)                31   1.2  
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)              31   1.2  
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)               31   1.2  
SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)                      31   1.6  
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)                  30   2.1  
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.1  
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   2.1  
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)                   30   2.8  
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)                 30   2.8  
SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)              29   3.7  
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.7  
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)                   29   3.7  
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.9  
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)            29   6.5  
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.5  
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.5  
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)               28   8.6  
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.6  
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)              28   8.6  
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)                     28   8.6  
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)                   28   8.6  

>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1141

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLSLVLA 343
           T  + T  +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +  LA
Sbjct: 561 TAPEATTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEA-TTASLATTASLA 619

Query: 344 VGSKE 358
             + E
Sbjct: 620 TTAPE 624



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 322
           T  + T  +L+TTA  +   P+TTT  E  T   TT     T      T+SL
Sbjct: 134 TAPEATTASLVTTAPEATTAPETTTAPEATTAPETTTASLVTTAPETTTASL 185



 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTSSLPLSLVLA 343
           T  + T  +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +   A
Sbjct: 519 TAPETTTASLATTAPETTTAPETTTASLATTAPETTTASLVTTAPEA-TTASLATTAPEA 577

Query: 344 VGSKEYLRKLI 376
             + E    L+
Sbjct: 578 TTAPETTTALL 588



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTVPKADLTS 316
           T  + T  +L TTA  +   P+TTT  + T    +TT  +  T P+    S
Sbjct: 188 TAPEATTASLATTASLATTAPETTTASLATTAPEATTASLATTAPETTTAS 238


>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +2

Query: 167 TPTQETATNLLTTART--SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLV 337
           T T    TN  TT  T  + I+  TTT+  T T ++TT+  T T     +T+++  +++
Sbjct: 8   TVTTTIITNATTTIITLSTTIITTTTTITTTTTTITTTITPTITTTTTIITTTITTTII 66


>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
          Length = 839

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 200 TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 319
           T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267


>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
          Length = 3094

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 200  TTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 319
            T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +2

Query: 173 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 319
           ++ T     T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 767 SETTVAPETTDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814


>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
          Length = 3445

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 143  KTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTT 274
            K P+   KT    TAT   T A  + + P+TT + ET   L TT
Sbjct: 1682 KAPVDQLKTKQPTTATAKTTAAPETTVAPETTVVPETTPALETT 1725


>SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)
          Length = 127

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +2

Query: 161 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 286
           W T T  T T   TT  T+     TTT  +T T  +TT  IT
Sbjct: 53  WTTTTTSTITT--TTTTTTTTKTTTTTTTKTTTTTATTTEIT 92


>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
          Length = 266

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/53 (28%), Positives = 33/53 (62%)
 Frame = +2

Query: 188 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 346
           TN++TT+ T++I   T T+  T T ++ T+ IT T+    +T ++ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218


>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1393

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 331
           TP+  T T L+ T  +   L   TTL+ T  +L+T   +  T P+A +T +  ++
Sbjct: 728 TPSLTTQTTLIATTPS---LTTQTTLIATTPSLTTQTTLIATTPEASITQTTTIA 779


>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1296

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 164 KTPTQETATNLLTTARTSLILPKTTTLMETA-TNLSTTVHITWTVPKADLTSSLPLSLVL 340
           +T   +TAT+  T   TS +L  +T L+ T  T+ +T+ H+T       LTS+  ++ V+
Sbjct: 432 RTTVTDTATS--TAVVTSTVLVASTRLLSTVKTHTATSTHVTTATSTDTLTSTAIVTSVM 489


>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1438

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +2

Query: 131 WPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADL 310
           + T KT     KT T   A   +TT  T+     TTT   T T  +TT        K   
Sbjct: 21  YATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTIT 80

Query: 311 TSSLPLSLVLA 343
            +++ ++  +A
Sbjct: 81  ITTVTITTAVA 91


>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
          Length = 382

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +2

Query: 131 WPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADL 310
           + T KT     KT T   A   +TT  T+     TTT   T T  +TT        K   
Sbjct: 143 YATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTIT 202

Query: 311 TSSLPLSLVLA 343
            +++ ++  +A
Sbjct: 203 ITTVTITTAVA 213


>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
          Length = 249

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 343
           T T  TA  +++T  T+     TTT+  T T  +TT+ IT T+     T +  ++  ++
Sbjct: 125 TTTTITAV-IISTTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTIS 182



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 322
           T T   +T + TT  T+ I   TTT+  TA  +STT   T T     +T+++
Sbjct: 104 TTTTTISTTISTTTTTTTISTTTTTI--TAVIISTTTTTTSTANTTTITATI 153


>SB_47133| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLST--TVHITWTVPKADLTS 316
           +PT  T+T       TS+  P TTT   T T++ST  T  +T + P A  T+
Sbjct: 56  SPTSSTSTTQHQVTTTSVSTPSTTTPPRT-TSISTTKTTRVTTSTPSAVTTA 106


>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
          Length = 972

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADL 310
           T T  T     TTA T+     TTT   T T  +TT+ I W     D+
Sbjct: 526 TATATTTATATTTATTAATATTTTTTTTTNTTTNTTI-IIWIAAVTDV 572


>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 286

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +2

Query: 182 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 316
           TA N  TT  T+     TTT   T    +TT + T T P    TS
Sbjct: 108 TAPNATTTTPTATTTTTTTTTTTTPYATTTTPNTTTTTPNTTTTS 152



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +2

Query: 185 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 316
           AT  +TT   ++  P  TT   TAT  +TT   T T P A  T+
Sbjct: 96  ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138



 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 316
           T T  TAT   TT  T+     TTT   T T   TT + T T P A  T+
Sbjct: 113 TTTTPTATTTTTTTTTTTTPYATTTTPNTTT---TTPNTTTTSPNATTTT 159



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 131 WPTLKTPLG*WKTP-TQETATNLLTTA-RTSLILPKTTTLMETATNLSTTVHITWTVP 298
           + T  TP     TP T  T+ N  TT   T+   P TTT   TAT  +TT   T T P
Sbjct: 133 YATTTTPNTTTTTPNTTTTSPNATTTTPNTTTTTPNTTTTTPTAT--TTTPTATTTTP 188


>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
          Length = 587

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 182 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 292
           T T   TT  T+ I   TTT   T TN +TTV+ T T
Sbjct: 545 TITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581


>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +2

Query: 173  TQETATNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTVPKADLTSSLPL 328
            T    T ++TT  T+ I+  T T   T T ++TTV    IT T+    +T++ P+
Sbjct: 1081 TTTITTTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITTTDPI 1135


>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 316
           T T  T T   TTA  +     TTT   T T  +TT   T T      T+
Sbjct: 14  TTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 307
           T    TAT    TA T+     TTT   T T  +TT   T T    D
Sbjct: 21  TTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTTKNND 67


>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
          Length = 678

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 182 TATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 346
           T  +L+T   T  L++  T  L+   T +   V IT T+P   +T+ LPL ++  +
Sbjct: 278 TILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVITTI 333


>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2317

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +2

Query: 167 TPTQETATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 325
           T   ET     TTA   +  LPKTT + ET     TT     T  + DLT  LP
Sbjct: 225 TAAPETIAKPETTAPPETTALPKTTAVPETTAAPETTAKPETTDLRVDLTIFLP 278


>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1211

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/52 (38%), Positives = 24/52 (46%)
 Frame = +2

Query: 176 QETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 331
           + TATN   TA     +PKTTT  ET     TTV    T    D   S+ +S
Sbjct: 355 ETTATN---TAPDKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEISVTIS 403


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = +2

Query: 173 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 298
           TQ+T TNL +T + +     TTTL  T    +TT   T T+P
Sbjct: 190 TQQTTTNLPSTRQPTTNQQTTTTLPSTKQP-TTTQQTTTTIP 230


>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
          Length = 649

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +2

Query: 167 TPTQET-ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLA 343
           T +Q T AT  L+T+ T      +T+  +  T LST+     T P    T +   + V A
Sbjct: 451 TKSQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEA 510

Query: 344 VGS 352
             S
Sbjct: 511 TTS 513


>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 778

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +2

Query: 167 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAV 346
           T T  T T    TA T+     TTT   TAT  +T          A  T+++  ++ + V
Sbjct: 319 TATVTTTTTATATATTTATATATTTATATATATATATATATVTATATATATVTATVTVTV 378


>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
          Length = 888

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +2

Query: 128 LWPTLKTPLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 307
           L+PT   P   + T T  T   L  T RT   LP T +   T  + + T     T+P  D
Sbjct: 139 LYPTQSAPYRLYPTQTVRTIQTLPNTVRTIQTLPSTDSAHRT-DHPTQTESTVQTLPSTD 197


>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
          Length = 1165

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +2

Query: 182 TATNLLTTARTSLILPKTTTLMETA--TNLSTTVHITWTVPKADLTSSLPLSLVLAV 346
           T T  L    T L L   TTL+     T +   V IT T+P   +T++LPL ++  +
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTI 597


>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
          Length = 736

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/57 (26%), Positives = 23/57 (40%)
 Frame = +1

Query: 157 VVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 327
           V  +A +    +P +N   + +PP    P     +P+D       RPQ R    P P
Sbjct: 148 VASSASAPENNQPSENTETLTSPPPPSKPPKTTEDPMDRDWRVGPRPQQRSADAPLP 204


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,363,686
Number of Sequences: 59808
Number of extensions: 348629
Number of successful extensions: 1431
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1387
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2491217872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -