Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F23
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0487 + 16471538-16471540,16471694-16471795,16471880-164719... 133 2e-31
02_03_0220 + 16545571-16545573,16545717-16545818,16545980-165460... 59 5e-09
04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590 57 2e-08
07_01_0080 + 587674-588510 32 0.54
04_04_0303 + 24269467-24270741 31 0.94
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 31 1.6
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 30 2.2
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 30 2.9
09_03_0145 - 12749288-12751510 29 3.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.8
08_02_0758 + 20848078-20849579,20849660-20849850,20849944-208501... 29 5.0
09_04_0506 - 18188785-18190599 28 8.8
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 8.8
03_01_0515 - 3864796-3865425 28 8.8
>04_03_0487 +
16471538-16471540,16471694-16471795,16471880-16471908,
16472619-16472745
Length = 86
Score = 133 bits (321), Expect = 2e-31
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +3
Query: 87 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 266
IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ ITTVFSH+Q VVVC GC T+LC
Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLC 66
Query: 267 QPTGGRARLTEGCSFRRK 320
QPTGG+ARLTEGCSFRRK
Sbjct: 67 QPTGGKARLTEGCSFRRK 84
>02_03_0220 +
16545571-16545573,16545717-16545818,16545980-16546008,
16549421-16553036
Length = 1249
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +3
Query: 87 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHA 224
IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ ++ F A
Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNMSVRFDIA 52
>04_03_0796 + 19721379-19721381,19721479-19721580,19722558-19722590
Length = 45
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 87 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKI 203
IDLL+P E+ KHK KRLV PNS+FMDVKC GC+ +
Sbjct: 7 IDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFSM 45
>07_01_0080 + 587674-588510
Length = 278
Score = 32.3 bits (70), Expect = 0.54
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIPRXKXXP 686
P PP P G PPP PPPP R P
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPPPPPLFTRRSHAP 130
>04_04_0303 + 24269467-24270741
Length = 424
Score = 31.5 bits (68), Expect = 0.94
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 84 AIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTIL 263
A+ LLHP L ++PH S +D CP Y+I ++ RVV C+++
Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYRIRSL----ARVV----CASVS 197
Query: 264 CQPTGGRA 287
C TG A
Sbjct: 198 CSATGAGA 205
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P P P PP K G PPPP
Sbjct: 589 PSPPPAPKAAPPPPPPKSTGPGPPRPPPP 617
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP K G P PP
Sbjct: 587 PEPSPPPAPKAAPPPPPPKSTGPGPPRPP 615
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P PP P PPPK PPPP +P
Sbjct: 589 PSPPPAPKAAPPPPPPKSTGP-GPPRPPPPAMP 620
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +3
Query: 570 PXXPPXPXXGGXX--PPPKKKKXWXXXXPPPPXIP 668
P PP P PPP+ + W PPPP P
Sbjct: 108 PYRPPPPPRKKPQFQPPPQPPRAWDPSPPPPPPAP 142
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP K PPPP
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPPP 377
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P PP P PPP K PPPP P
Sbjct: 349 PPPPPPPPPPPPPPPPPKLNTAPKPPPPPPPPP 381
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPPXXS 666
P P PPP PP+ PPPP S
Sbjct: 351 PPPPPPPPPPPPPPPKLNTAPKPPPPPPPPPS 382
>09_03_0145 - 12749288-12751510
Length = 740
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPP 659
P PP P G PPP PPPP
Sbjct: 28 PSPPPPPPPPGIQPPPPALPGMPHGRPPPP 57
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 579 PPXPXXGGXXPPPKKKKXWXXXXPPPPXI 665
PP P G PPP PPPP I
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPPPPI 1127
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 530 PPXXXXPXXXXXKXPXPXXPXXGGXXXPPKKKKXLXXXXPPPP 658
PP P K P P P G PP PPPP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP PPPP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPP 341
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 530 PPXXXXPXXXXXKXPXPXXPXXGGXXXPPKKKKXLXXXXPPPPXNP 667
PP P K P P P G PP K PPPP P
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK-----GPSPPPPPPP 370
>08_02_0758 +
20848078-20849579,20849660-20849850,20849944-20850179,
20850254-20850973
Length = 882
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQ-KKKXXGXXXPPPP 657
P P PPP PP K + G PPPP
Sbjct: 426 PKPAPPPPPQKNPPPNLKGQCYGQPPPPPP 455
>09_04_0506 - 18188785-18190599
Length = 604
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP ++ PPPP
Sbjct: 52 PQPPPPPQQQQQPPPISQQPPPLQAPPPP 80
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P P P G PPP PPPP +P
Sbjct: 358 PAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALP 390
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 579 PPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
PP P G PPP PPPP P
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPP 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,920,773
Number of Sequences: 37544
Number of extensions: 375030
Number of successful extensions: 2006
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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