Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F23
(901 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.24
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 33 0.24
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 33 0.31
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 33 0.42
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 1.7
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 2.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.2
SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 30 2.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 3.9
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 29 3.9
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38) 29 6.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 6.8
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 8.9
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP G PP G PPPP
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPP 659
P PP P GG PPP PPPP
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPPPPP 705
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXI 665
P PP GG PPP PPPP I
Sbjct: 664 PPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPI 695
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 530 PPXXXXPXXXXXKXPXPXXPXXGGXXXPPKKKKXLXXXXPPPPXNPA 670
PP P P P P GG PP PPPP PA
Sbjct: 127 PPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPA 173
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 33.1 bits (72), Expect = 0.31
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +3
Query: 78 PLAID--LLHPSPA-SERRKHKL-KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRV 233
PL D L H P S R K + KR P P ++K P Y++TT+ +H+ RV
Sbjct: 404 PLTRDPTLTHSVPIISGRLKTSMNKRTKPKPGERATEIKSPSTYQVTTMVTHSPRV 459
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P PP P G PPP + PPPP P
Sbjct: 714 PPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPP 746
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 579 PPXPXXGGXXPPPKKKKXWXXXXPPPP 659
PP P GG PPP + PPPP
Sbjct: 644 PPNPFFGGIPPPPPGGGMFPPPPPPPP 670
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 577 PXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P PPP G P Q G PPPP
Sbjct: 931 PLPPPPPGGSAPSQPPPPGGNAPPPPP 957
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP PPPP
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPP 948
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP G P G PPPP
Sbjct: 290 PVPPPPPADGSAPAPPPPPPPGGAPPPPP 318
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P PP P G PP PPPP P
Sbjct: 290 PVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPP 322
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PPQ PPPP
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPP 407
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIPRXKXXP 686
P PP P PPP+ PPPP P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 530 PPXXXXPXXXXXKXPXPXXPXXGGXXXPPKKKKXLXXXXPPPPXNPAXXXXP 685
PP P P P P PP PPPP PA P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
>SB_18024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIPR 671
P PP PPP ++ + PPPP PR
Sbjct: 52 PPPPPRFYDNDIPPPPPPRRGFYDDYPPPPPPPR 85
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 577 PXPPPXXGXXXPPQKKKXXGXXXPPPPXXS 666
P PPP G PP + PPPP S
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPPPPSRS 334
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPP---KKKKXWXXXXPPPPXIP 668
P PP P GG PPP + + PPPP P
Sbjct: 363 PPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 583 PPPXXGXXXPPQKKKXXGXXXPPPP 657
PPP G PP G PPPP
Sbjct: 355 PPPVGGAAPPPPPPPPVGGPPPPPP 379
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPP 654
P P PPP PP + G PPP
Sbjct: 239 PLPAPPPGENRPPPPMRGPTSGGEPPPP 266
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P P P G PPP ++ PPPP P
Sbjct: 361 PGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPP 393
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPP 654
P P PPP PP + G PPP
Sbjct: 151 PLPAPPPGENRPPPPMRGPTSGGEPPPP 178
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P P P G PPP ++ PPPP P
Sbjct: 273 PGRAPQPLGGPPPPPPGRRPPSGKINPPPPPPP 305
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP G PP G PPPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTN--GPPPPPPP 400
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP G PP G PPPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTN--GPPPPPPP 410
>SB_15022| Best HMM Match : Zona_pellucida (HMM E-Value=5.6e-38)
Length = 525
Score = 28.7 bits (61), Expect = 6.8
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 249 CSTILCQPTGGRARLTEGCSFRRKQ 323
C ++CQ + ++R T+GC ++R++
Sbjct: 230 CEVLVCQRSDKKSRCTKGCPYQRRR 254
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPPXXSR 669
P P PPP PP PPPP R
Sbjct: 207 PPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPR 239
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 570 PXXPPXPXXGGXXPPPKKKKXWXXXXPPPPXIP 668
P PP P PPP PPPP P
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSP 237
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPP 654
P P P G PPQ++ G PPP
Sbjct: 482 PPPSQDPTTGNPSPPQEQPTTGNPTPPP 509
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 583 PPPXXGXXXPPQKKKXXGXXXPPPP 657
PPP G PP G PPPP
Sbjct: 123 PPPPTGTLPPPPVTPPPGPETPPPP 147
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 571 PXPXPPPXXGXXXPPQKKKXXGXXXPPPP 657
P P PPP PP PPPP
Sbjct: 163 PPPNPPPPNAPYPPPPYPPPPNPPYPPPP 191
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,456,787
Number of Sequences: 59808
Number of extensions: 310122
Number of successful extensions: 1341
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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