Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F22
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.57 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   4.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.0  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 522 KIYMLCTTAGSIKPSSLQMLFTR 454
           KIY LC     + PS+L +++ R
Sbjct: 29  KIYALCVVTALVTPSALSIIYYR 51


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 692 LIRXPDEDSDEALIYD 739
           ++R P+ED+  A +YD
Sbjct: 194 IVRVPEEDNPHAKLYD 209


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +2

Query: 119 HDSIKSQLITDGYAILEDFLH-VAECDEIKAAGLEFTENLPDIEERATFSTTEK 277
           +D+I  + +     +L+ ++  + E       GLE  +N+PD  E      +EK
Sbjct: 30  YDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 346 HRRRWKSYSRTGDFI 390
           H   WKSY RT  FI
Sbjct: 120 HMLIWKSYKRTQIFI 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,136
Number of Sequences: 336
Number of extensions: 4132
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)