Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F22
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical ...   172   3e-43
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    33   0.34 
AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AL110471-3|CAB63308.1|  818|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL034364-6|CAA22254.2|  818|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine re...    28   7.2  
Z98877-11|CAB63408.1|  887|Caenorhabditis elegans Hypothetical p...    28   9.5  
Z92804-3|CAB07250.1|  492|Caenorhabditis elegans Hypothetical pr...    28   9.5  
Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical
           protein Y105C5B.9 protein.
          Length = 288

 Score =  172 bits (418), Expect = 3e-43
 Identities = 91/233 (39%), Positives = 133/233 (57%), Gaps = 5/233 (2%)
 Frame = +2

Query: 128 IKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFST-TEKTHLKDKYF 301
           ++ +   DG+ ++E+  +  E DE+K +  +   ++   E  ++ FST  E  H  D YF
Sbjct: 4   LREKFERDGFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYF 63

Query: 302 LXSNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKEL 481
           L S+DKIR FFEEGA+D DG LTV  + +LNK+GH LH L P F   T++ ++++I KE+
Sbjct: 64  LNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEI 123

Query: 482 GFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWL- 655
           G+ EP VVQSMYIFK P IG  V  H D+T+L  +P   + G WIA++EA+V+NGCL   
Sbjct: 124 GYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFI 183

Query: 656 -XXXXXXXXXXXXLIRXPDEDSDEALIYDKPAAGYPQSSFTPIPVSKXNVYTI 811
                         +R  D      L +      Y QS F  +P+SK ++  I
Sbjct: 184 PGSHKDTSSANYRFVRTHDTSGGALLKFIGTRPTYDQSKFQHVPISKGSLILI 236


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
 Frame = +2

Query: 425 PIFRCYTYSERVKSICKEL-GFIEPAV--VQSMYIFKNPGIG---SEVVAHQDATYLYTE 586
           P+   Y  +++V  + ++L G  +  +  + +M I K P  G   S    HQD  Y    
Sbjct: 108 PVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGALTSRHPMHQDLIYFPWR 167

Query: 587 PTP-PVGFWIALEEATVQNGCL 649
           P    V  W A+E+   QNGCL
Sbjct: 168 PEELTVCAWTAMEKINKQNGCL 189


>AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical
           protein F37C4.8 protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -1

Query: 598 WGSWFCVQICCV--LMCNHFGTNARVLKNIHALHHSR 494
           W +W C   CC    +C  F T+    K + ++ H R
Sbjct: 53  WSNWSCCSACCCPKAVCKQFETSGDKCKTVKSIQHRR 89


>Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical
           protein T07G12.10 protein.
          Length = 584

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 152 GYAILEDFLHV--AECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLXSNDK 319
           GY +L+D   +  A C+E++   +   EN+P +    TFS T      + Y    N K
Sbjct: 199 GYEVLDDSNKILTANCEEVE---MSLCENIPGVNNARTFSNTPYDDFLNIYSTPKNPK 253


>AL110471-3|CAB63308.1|  818|Caenorhabditis elegans Hypothetical
           protein W06D4.6 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 513 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 599
           CI  RT AL+ K+L +K +H IC +N   Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469


>AL034364-6|CAA22254.2|  818|Caenorhabditis elegans Hypothetical
           protein W06D4.6 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 513 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 599
           CI  RT AL+ K+L +K +H IC +N   Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469


>Z98877-2|CAB11570.1|  907|Caenorhabditis elegans Hypothetical
           protein Y69H2.2 protein.
          Length = 907

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 627 PQFKTAVCGCLEALTGQECTDV 692
           P+FK   C CL  LTG  C+++
Sbjct: 478 PKFKGYDCTCLTGLTGANCSEI 499


>AC024806-3|AAP13749.1|  363|Caenorhabditis elegans Serpentine
           receptor, class w protein40 protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 83  SFCFCKFIASIMHDSIKSQLITDGYAILEDFLHVAECDEIK 205
           + CF  F A+I+H  I SQ      ++   F+ +A CD I+
Sbjct: 43  TICFVGFFANIVHLIILSQKSMRNLSVNVFFIGIAICDTIR 83


>Z98877-11|CAB63408.1|  887|Caenorhabditis elegans Hypothetical
           protein Y69H2.11 protein.
          Length = 887

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 624 KPQFKTAVCGCLEALTGQECTDV 692
           KP+FK   C C+  LTG  C+ +
Sbjct: 431 KPKFKGYDCTCITGLTGVNCSTI 453


>Z92804-3|CAB07250.1|  492|Caenorhabditis elegans Hypothetical
           protein K05D4.4 protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 131 KSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFSTTEK 277
           K Q + +G A +E FL  A         L+F+ NLPD+++ +  F T  K
Sbjct: 433 KRQCLGEGLARMELFLFFANIFNRYDVQLDFSGNLPDLDKSKDNFVTPRK 482


>Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical
           protein C17E4.2 protein.
          Length = 819

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
 Frame = +2

Query: 149 DGYAILEDFLHVAECDEIKAAGLE-FTENLPDIEERATFSTTEKTHLKDKYFLXSNDKIR 325
           D  A+L DF   A  D+     +E   + + ++EE+  F T E T L D+     N+ + 
Sbjct: 482 DMAALLRDFEKFAISDKESKRMVEGCKKKIEELEEQNRFLTVEITKLLDEKEAMLNEAME 541

Query: 326 CFFEEGAIDADGNLTVEPEISLNKVGHA 409
              +E + D+D +   E + S ++  H+
Sbjct: 542 DDEDESSDDSDMSYEDEEDDSEDEDDHS 569


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,947,869
Number of Sequences: 27780
Number of extensions: 392961
Number of successful extensions: 1087
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)