Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F22
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   6.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   6.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.2  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   8.1  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    22   8.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   8.1  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   8.1  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   8.1  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 518 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           ++KN  I  E +      Y    P  P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 518 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           ++KN  I  E +      Y    P  P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 521 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 521 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 342 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 376


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 503 PQPAQ*SQALCKCSSRVHYTCNI 435
           PQP    +AL KC +R   TCN+
Sbjct: 701 PQPI--GKALSKCHNRNVTTCNM 721


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 311 NDKIRCFFEEGAIDADGN 364
           N+  +C  +EG   A+GN
Sbjct: 45  NNYFKCLMDEGRCTAEGN 62


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 521 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 106 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 140


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 521 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 625
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 347 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 381


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 311 NDKIRCFFEEGAIDADGN 364
           N+  +C  +EG   A+GN
Sbjct: 45  NNYFKCLMDEGRCTAEGN 62


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 311 NDKIRCFFEEGAIDADGN 364
           N+  +C  +EG   A+GN
Sbjct: 45  NNYFKCLMDEGRCTAEGN 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,523
Number of Sequences: 438
Number of extensions: 4871
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)