Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F22
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01490.1 68415.m00072 phytanoyl-CoA dioxygenase (PhyH) family... 174 7e-44
At1g22090.1 68414.m02762 expressed protein contains Pfam profile... 30 1.7
At5g39500.1 68418.m04783 pattern formation protein, putative sim... 29 2.9
At3g19280.1 68416.m02445 glycoprotein 3-alpha-L-fucosyltransfera... 29 5.1
At1g73810.1 68414.m08546 expressed protein contains Pfam profile... 29 5.1
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 6.8
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 6.8
At3g30230.1 68416.m03820 myosin heavy chain-related similar to M... 28 8.9
At3g23840.1 68416.m02997 transferase family protein low similari... 28 8.9
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 28 8.9
>At2g01490.1 68415.m00072 phytanoyl-CoA dioxygenase (PhyH) family
protein contains Pfam profile PF05721: Phytanoyl-CoA
dioxygenase (PhyH); weak similarity to Phytanoyl-CoA
dioxygenase, peroxisomal precursor (EC 1.14.11.18)
(Phytanoyl-CoA alpha-hydroxylase) (PhyH) (Phytanic acid
oxidase) (Swiss-Prot:O14832) [Homo sapiens]
Length = 283
Score = 174 bits (423), Expect = 7e-44
Identities = 90/224 (40%), Positives = 122/224 (54%), Gaps = 2/224 (0%)
Frame = +2
Query: 146 TDGYAILEDFLHVAECDEIKAAGLEFTE--NLPDIEERATFSTTEKTHLKDKYFLXSNDK 319
+ GY ++E F A DEI+ E N D + FST + H D YF S +K
Sbjct: 17 SQGYLVIESF---ASEDEIRGLRKRMDELLNQFDCSVSSIFSTKNQKHTTDNYFFESAEK 73
Query: 320 IRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIEPA 499
I FFEE A DG L ++S+NKVGHALH L P+++ +TYS + S+ LG+ P
Sbjct: 74 ISFFFEEKAFGDDGKLKQPKQLSINKVGHALHELDPLYKDFTYSSKFSSLASSLGYRRPV 133
Query: 500 VVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEEATVQNGCLWLXXXXXXXX 679
V+QSMYIFK PGIG EVV HQD +++YT+P G WIALE++T+ NGCLW
Sbjct: 134 VMQSMYIFKQPGIGGEVVPHQDNSFVYTDPQSCTGLWIALEDSTLVNGCLWAIPGSHKNG 193
Query: 680 XXXXLIRXPDEDSDEALIYDKPAAGYPQSSFTPIPVSKXNVYTI 811
IR D + +D+P+ Y Q F I + ++ I
Sbjct: 194 LVRRFIR-----GDNGITFDQPSPSYEQKDFVSIEMKAGSLIAI 232
>At1g22090.1 68414.m02762 expressed protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 329
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 227 ENLPDIEERATFSTTEKTHLKDKYFLXSNDKIRCFFEEGAIDADGNLTV 373
+ LPD F T++ HL + L ND IR + E + D LTV
Sbjct: 152 DELPDWPSEIAFDDTKRFHLVKESELRDNDWIRLYLELTLVAHDRFLTV 200
>At5g39500.1 68418.m04783 pattern formation protein, putative
similar to SP|Q42510 Pattern formation protein EMB30
{Arabidopsis thaliana}; contains Pfam profile PF01369:
Sec7 domain
Length = 1443
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 692 NVCALL-TCESLETATDSRFELWLLQELSRSQLGELVLCTDMLRLDVQPLRNQCQ 531
++C ++ TC + + S+ EL LQ ++R + EL+ C + PL N+C+
Sbjct: 183 DICTIVNTCLRVVHQSSSKSEL--LQRIARHTMHELIRCIFSQLPFISPLANECE 235
>At3g19280.1 68416.m02445 glycoprotein 3-alpha-L-fucosyltransferase
A / FucTA / core alpha-(1,3)-fucosyltransferase (FUT11)
identical to Glycoprotein 3-alpha-L-fucosyltransferase A
(Core alpha-(1,3)-fucosyltransferase)(Fuc-T C3) (FucTA)
(FucT1) (AtFUT11)(SP:Q9LJK1) from [Arabidopsis
thaliana]; contains Pfam profile PF00852: Fucosyl
transferase; identical to cDNA
alpha1,3-fucosyltransferase (FucTA) GI:13992482
Length = 501
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 20 HYRESLRFESCVATQYRRYLNSFCFCKFIASIMHDSIKSQLITDGYAILEDFLHVAECDE 199
HY+ SL FE+ T Y+ F +A + + + I + + FLH+ + D+
Sbjct: 262 HYKFSLAFEN---TNEEDYVTEKFFQSLVAGSVPVVVGAPNIEEFAPSPDSFLHIKQMDD 318
Query: 200 IKAAG--LEFTENLPD 241
+KA +++ + PD
Sbjct: 319 VKAVAKKMKYLADNPD 334
>At1g73810.1 68414.m08546 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 418
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +1
Query: 277 NTFKG*IFPXKQRQDKV----FLRRGSHRRRWKSYSRTGDFIKQGRSR 408
+TF +FP K + + RRG H R++ S TG+F+++ R+R
Sbjct: 332 STFVHAMFPGKNANRSLTWTDWSRRGPHPRKYTRRSVTGEFLRRVRNR 379
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 344 AIDADGNLTVEPEISLNKVGHAL 412
AIDADG L P I NK G L
Sbjct: 634 AIDADGGLQASPRIRFNKEGSLL 656
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 344 AIDADGNLTVEPEISLNKVGHAL 412
AIDADG L P I NK G L
Sbjct: 634 AIDADGGLQASPRIRFNKEGSLL 656
>At3g30230.1 68416.m03820 myosin heavy chain-related similar to
Myosin heavy chain, non-muscle (Zipper protein) (Myosin
II)(SP:Q99323) {Drosophila melanogaster}
Length = 527
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 544 RSGCTSRRNISVHRTNSP 597
R GC+ RRN+S HR NSP
Sbjct: 160 RGGCSPRRNLSPHR-NSP 176
>At3g23840.1 68416.m02997 transferase family protein low similarity
to hypersensitivity-related gene [Nicotiana tabacum]
GI:1171577, acetyl-CoA:benzylalcohol acetyltranferase
[Clarkia concinna] GI:6166330; contains Pfam profile
PF02458: Transferase family
Length = 420
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 695 IRXPDEDSDEALIYDKPAAGYPQSSFTPI 781
+R PD DE+L+Y +P P +F+P+
Sbjct: 115 LRVPDRSVDESLVYHQPVG--PDLAFSPL 141
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 476 LCKCSSRVHYTCNI*KSDVEDAVRDRPCLMKSPVRL*DFHRRRWL 342
+C S HY CN + VEDA D+ L++S ++ + RW+
Sbjct: 307 ICGKSYSDHYACN---NYVEDADHDKRTLLQSEIKRYTHYYVRWV 348
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,758,427
Number of Sequences: 28952
Number of extensions: 362286
Number of successful extensions: 999
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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