Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F18
(964 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.17
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.23
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.23
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 33 0.40
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 33 0.40
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.40
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.40
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 33 0.40
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.70
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 31 0.92
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.6
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 1.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.6
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 2.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 30 2.8
U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical pr... 30 2.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.8
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 30 2.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.8
AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical... 30 2.8
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 30 2.8
AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormo... 30 2.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 3.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 3.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.9
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 29 4.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 4.9
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 26 6.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 6.5
AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical... 29 6.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.5
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr... 28 8.6
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 8.6
U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein. 28 8.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 8.6
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 28 8.6
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 8.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.6
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 28 8.6
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 28 8.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 8.6
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 125 GGGGCGGGCGGGGGGGCGGGGGGGC 149
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 162 GCGGGGGGCGGGGGGGCGGGGGGGC 186
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 154 GGCGGGGGGCGGGGGGCGGGGGGGC 178
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGC 52
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGC 92
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 71 GCGGGGGGCGGGGGCGGGGGGCGG 94
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGC 99
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G G GG GGC
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGC 105
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 139 GGCGGGGGGGCGGGGGGCGGGGGGC 163
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 146 GGGCGGGGGGCGGGGGGCGGGGGGC 170
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 132 GCGGGGGGGCGGGGGGGCGGGGGGC 156
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG GG G G GG GGC
Sbjct: 23 GGGGGGGGGCGGGCGGGGGC 42
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG GG G G GG GGC
Sbjct: 66 GGGGGGCGGGGGGCGGGGGC 85
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 864 PGXXXXGGGXRXXGGXGXGG--GGXGGC 787
P GGG GG G GG GG GGC
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGC 48
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG GG G GGGG GGC
Sbjct: 123 GGGGGGCGG-GCGGGGGGGC 141
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGG--XGGC 787
G GGG GG G GGGG GGC
Sbjct: 83 GGCGGGGGGCGGGGGGCGGGGGCGGGC 109
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGCXR 781
G GGG G G GGG GGC R
Sbjct: 166 GGGGCGGGGGGGCGGGGGGGCGGGCGR 192
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 92 GGGCGGGGGGCGGGGGCGGGGGGGC 116
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 100 GGCGGGGGCGGGGGGGCGGGGGGGC 124
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 113 GGGCGGGGGGGCGGGGGGG 131
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 86 GGGGCGGGGCGGGGGGCGG 104
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 115 GGCGGGGGGCGGGGGGCGGGGGGGC 139
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGC 147
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 864 PGXXXXGGGXRXXGGXGXGGGGXGGC 787
P GGG GG G G GG GGC
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGC 48
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 843 GGXRXXGGXGXGGGGXGGC 787
GG GG G GGGG GGC
Sbjct: 153 GGCGGGGGGGCGGGGGGGC 171
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGC 110
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGG 112
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGC 117
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGC 124
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGC 131
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG GG G G GG GGC
Sbjct: 84 GGGGGGCGGGGGGCGGGGGC 103
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGG GG
Sbjct: 262 GGYSTGGGGGYAGGGGGGGGSSGG 285
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGGG GGC
Sbjct: 115 GGCGGGGGGCGGGGGGCGGGGGGGC 139
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGC 147
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 864 PGXXXXGGGXRXXGGXGXGGGGXGGC 787
P GGG GG G G GG GGC
Sbjct: 23 PSAGGGGGGGGCGGGCGGGCGGGGGC 48
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 843 GGXRXXGGXGXGGGGXGGC 787
GG GG G GGGG GGC
Sbjct: 153 GGCGGGGGGGCGGGGGGGC 171
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 86 GGGGCGGGGGGCGGGGGCGGGGGGC 110
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGG 112
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 93 GGGGCGGGGGCGGGGGGCGGGGGGC 117
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGC 124
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G GGG GG G GGG GGC
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGC 131
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG GG G G GG GGC
Sbjct: 84 GGGGGGCGGGGGGCGGGGGC 103
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGG GG
Sbjct: 262 GGYSTGGGGGYAGGGGGGGGSSGG 285
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.9 bits (74), Expect = 0.17
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGCXR 781
G GGG R GG G GGGG GG R
Sbjct: 95 GGGGGGGGGRGGGGGGRGGGGGGGGGR 121
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGCXR 781
G GGG GG G GGGG GG R
Sbjct: 107 GGGGRGGGGGGGGGRGGGGGGRGGGGR 133
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXG 793
G GGG R GG G GGGG G
Sbjct: 112 GGGGGGGGGRGGGGGGRGGGGRG 134
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 85 GGGGNGGGGRGGGGGGGGG 103
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGG 113
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 100 GGGGRGGGGGGRGGGGGGGGGRGG 123
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG R GG G GGGG GG
Sbjct: 85 GGGGNGGGGR--GGGGGGGGGRGG 106
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGCXR 781
G G G GG G GGGG GG R
Sbjct: 78 GGNWGGNGGGGNGGGGRGGGGGGGGGR 104
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GG GG G GGGG GG
Sbjct: 73 GNNGGGGNWGGNGGGGNGGGGRGG 96
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 494 PXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P + G P + P PG PP PPP PP G P PP
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-PPPSRFGPPGMGGMPPPPPP 339
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P + G PP PPP P P P PP P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGRGXRNPX--TSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
P PP P G R P R PG PP PPP P GH
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP-PPPSRPPAPPSGHGM 380
Query: 632 XXXPPTP 652
PP P
Sbjct: 381 IPPPPPP 387
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P TPG P PPP P+ G P PP P
Sbjct: 278 PPTPGMTPRPPPP-----PSSGMWPPPPPPPP 304
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 569 GXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
G PP PPP PP+ P PPTP
Sbjct: 258 GQYPPVPPP----PPSVTPMPPPMPPTP 281
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P P P PPP PP PG P PP
Sbjct: 264 PPPPPSVTPMPPPM---PPTPGMTPRPPPP 290
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 494 PXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P + G P + P PG PP PPP PP G P PP
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPP-PPPSRFGPPGMGGMPPPPPP 349
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P + G PP PPP P P P PP P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGRGXRNPX--TSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
P PP P G R P R PG PP PPP P GH
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPP-PPPSRPPAPPSGHGM 390
Query: 632 XXXPPTP 652
PP P
Sbjct: 391 IPPPPPP 397
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P TPG P PPP P+ G P PP P
Sbjct: 288 PPTPGMTPRPPPP-----PSSGMWPPPPPPPP 314
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 569 GXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
G PP PPP PP+ P PPTP
Sbjct: 268 GQYPPVPPP----PPSVTPMPPPMPPTP 291
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P P P PPP PP PG P PP
Sbjct: 274 PPPPPSVTPMPPPM---PPTPGMTPRPPPP 300
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
PP P + G +P A +P TPG PP P P PG P PP P
Sbjct: 1221 PPPHTPSPFSAGPMSHHPMGPPA----YPGTPGSFPPTTPTYPGMTPRPG--PNFGPPGP 1274
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
PP P + G +P A +P TPG PP P P PG P PP P
Sbjct: 1221 PPPHTPSPFSAGPMSHHPMGPPA----YPGTPGSFPPTTPTYPGMTPRPG--PNFGPPGP 1274
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 512 GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPT 649
G R +++R P P PP P T PP G P PPT
Sbjct: 389 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT-GRPPRGSPPT 433
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQA----RXHPXTPGXXPPXPPPXTXXPPNP 619
G P PP+ P G G P + P P P PPP PP P
Sbjct: 235 GSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 620 GHQPXXXPPTP 652
PP P
Sbjct: 293 RAGSPPPPPPP 303
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 471 PXXGXXXPHXPKAGDXGIXXXPXPRPGXTPXPRGXXPPXHHLXPKXPRTRGTNPXXXXP 647
P G P P G P P+ G +P P G P P PR + P P
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-----PPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 512 GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPT 649
G R +++R P P PP P T PP G P PPT
Sbjct: 410 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT-GRPPRGSPPT 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQA----RXHPXTPGXXPPXPPPXTXXPPNP 619
G P PP+ P G G P + P P P PPP PP P
Sbjct: 256 GSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 620 GHQPXXXPPTP 652
PP P
Sbjct: 314 RAGSPPPPPPP 324
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 471 PXXGXXXPHXPKAGDXGIXXXPXPRPGXTPXPRGXXPPXHHLXPKXPRTRGTNPXXXXP 647
P G P P G P P+ G +P P G P P PR + P P
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-----PPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 512 GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPT 649
G R +++R P P PP P T PP G P PPT
Sbjct: 395 GPRKSSEESSESREEPRGPRRSPPTGSPPTGSPPT-GRPPRGSPPT 439
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQA----RXHPXTPGXXPPXPPPXTXXPPNP 619
G P PP+ P G G P + P P P PPP PP P
Sbjct: 241 GSPPPPPPPKGS--PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 620 GHQPXXXPPTP 652
PP P
Sbjct: 299 RAGSPPPPPPP 309
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +3
Query: 471 PXXGXXXPHXPKAGDXGIXXXPXPRPGXTPXPRGXXPPXHHLXPKXPRTRGTNPXXXXP 647
P G P P G P P+ G +P P G P P PR + P P
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-----PPPPRQKRQAPERSPP 351
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
PP P + G +P A +P TPG PP P P PG P PP P
Sbjct: 1221 PPPHTPSPFSAGPMSHHPMGPPA----YPGTPGSFPPTTPTYPGMTPRPG--PNFGPPGP 1274
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 578 PPXPPPXTXXPPNPGHQPXXXPPTP 652
PP PPP PP P H P PP P
Sbjct: 132 PPPPPPPPHYPPPPPHYP-PPPPAP 155
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGGC 787
G G G GG G GGGG GGC
Sbjct: 107 GGHGGGHGGAVGGGYGGGGGGGGGC 131
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 557 PXTPGXXPPXPP-PXTXXPPNPGHQPXXXPP 646
P P PP PP P T PP P P PP
Sbjct: 250 PGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P P P P P T PP P P PP P
Sbjct: 240 PSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGP 271
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/59 (27%), Positives = 20/59 (33%)
Frame = +2
Query: 470 SPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
+PP P G + S + H T PP PPP P+ P PP
Sbjct: 120 APPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/59 (27%), Positives = 20/59 (33%)
Frame = +2
Query: 470 SPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
+PP P G + S + H T PP PPP P+ P PP
Sbjct: 120 APPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPP 178
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 41 GGGYGGGGGGGYGGGGYGGGGRGG 64
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGCXR 781
GGG GG G GGGG GG R
Sbjct: 41 GGGYGGGGGGGYGGGGYGGGGR 62
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXX-PPXPPPXTXXPPNPGHQ 628
G P PP P + G + Q P TPG PP PP P PG
Sbjct: 207 GPPGPAGPPGPSGQPGSNGNA--GAPGAPGQVVDVPGTPGPAGPPGPPGPAGAPGQPGQS 264
Query: 629 PXXXPPTP 652
P P
Sbjct: 265 GSAQPGGP 272
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/68 (29%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXX-PPXPPPXTXXPPNPGHQ 628
G P PP P + G + Q P TPG PP PP P PG
Sbjct: 203 GPPGPAGPPGPSGQPGSNGNA--GAPGAPGQVVDVPGTPGPAGPPGPPGPAGAPGQPGQS 260
Query: 629 PXXXPPTP 652
P P
Sbjct: 261 GSGQPGGP 268
>Z75543-7|CAA99868.2| 139|Caenorhabditis elegans Hypothetical
protein K01D12.8 protein.
Length = 139
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 66 GSGGSGGGKGGKGGSGGGGGGSGG 89
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXX 637
P PP P G P T P PG PP PP PG P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 638 XPPTP 652
PP P
Sbjct: 772 PPPPP 776
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P PG PP PPP PP G + PP P
Sbjct: 762 PPPPGGCPPPPPP----PPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP---XXXP 643
PP P T G P P + G PP PPP PP P P P
Sbjct: 730 PPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 644 PTP 652
P P
Sbjct: 785 PPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXX 637
P PP P G P T P PG PP PP PG P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 638 XPPTP 652
PP P
Sbjct: 772 PPPPP 776
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P PG PP PPP PP G + PP P
Sbjct: 762 PPPPGGCPPPPPP----PPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP---XXXP 643
PP P T G P P + G PP PPP PP P P P
Sbjct: 730 PPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 644 PTP 652
P P
Sbjct: 785 PPP 787
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 867 DPGXXXXGGGXRXXGGXGXGGG-GXGG 790
D G GGG R GG G GGG G GG
Sbjct: 243 DRGGWGGGGGGRGYGGGGGGGGYGYGG 269
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/65 (30%), Positives = 20/65 (30%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPXX 637
P PP P G P T P PG PP PP PG P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPP---PPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 638 XPPTP 652
PP P
Sbjct: 355 PPPPP 359
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P PG PP PPP PP G + PP P
Sbjct: 345 PPPPGGCPPPPPP----PPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 473 PPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP---XXXP 643
PP P T G P P + G PP PPP PP P P P
Sbjct: 313 PPPGGLPPITGG-----PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 644 PTP 652
P P
Sbjct: 368 PPP 370
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGGG GG
Sbjct: 172 GGGYGGGGDGGYGGGGFGGGGMGG 195
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 230 GGGYGPGGGYGMGGGGGGG 248
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 864 PGXXXXGGGXRXXGGXGXGGGGXGG 790
P GGG GG G GGGG GG
Sbjct: 782 PTGSSGGGGGGGNGGSGGGGGGGGG 806
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG G G GGGG GG
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGG 807
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GG GG G GGGG GG
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGG 810
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GG G GG
Sbjct: 822 GGGGNGGGGNGGGGNGNGG 840
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
P TP P P PP+P +P PP+P
Sbjct: 147 PRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +3
Query: 492 PHXPKAGDXGIXXXPXPRPGXTPXPRGXXPPXHHLXPKXPRTR 620
P +AG P PR TP PR P + P P+ R
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRR 170
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 105 GGGYAAGGGGGGGGGGGGG 123
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GG GG G GGGG GGC
Sbjct: 106 GGYAAGGGGGGGGGGGGGGC 125
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 104 GGGGYAAGGGGGGGGGGGG 122
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
G P P P G+G P Q P G P P PP P P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
G P P P G+G P Q P G P P PP P P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 563 TPGXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
TP PPP + PP P QP PP P
Sbjct: 692 TPAPSTSVPPPTSVQPPQP-QQPPQGPPGP 720
>U64845-3|AAC48032.2| 312|Caenorhabditis elegans Hypothetical
protein F45F2.11 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 578 PPXPPPXTXXPPNP--GHQPXXXPPTP 652
PP PPP PP+P +P PP P
Sbjct: 228 PPIPPPQFFFPPSPHFSREPHSLPPMP 254
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
G P P P G+G P Q P G P P PP P P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
GDP P P R P ++ P TPG PP P PG QP
Sbjct: 4 GDPCSVEQP--PPPPIDFSRSLIAPTAIKQESHLIPSTPGTPTAFQPPQHANTPIPGIQP 61
Query: 632 XXXPP 646
P
Sbjct: 62 NLFNP 66
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
G P P P G+G P Q P G P P PP P P
Sbjct: 114 GKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNP 173
>AL110484-17|CAB54408.1| 586|Caenorhabditis elegans Hypothetical
protein Y38E10A.17 protein.
Length = 586
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GGGG GG
Sbjct: 459 GGGGGGSGGYGAGGGGSGG 477
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGGC 787
GGG G G GGGG GGC
Sbjct: 25 GGGCGGGCGGGCGGGGGGGC 44
>AC006699-1|ABA00171.1| 160|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 41 protein.
Length = 160
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQP 631
GDP P P R P ++ P TPG PP P PG QP
Sbjct: 46 GDPCSVEQP--PPPPIDFSRSLIAPTAIKQESHLIPSTPGTPTAFQPPQHANTPIPGIQP 103
Query: 632 XXXPP 646
P
Sbjct: 104 NLFNP 108
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +2
Query: 569 GXXPPXPPPXTXXPPNPGHQPXXXP-PTP 652
G PP PPP T P P +P P P P
Sbjct: 94 GYVPPPPPPPTQPEPEPEPRPEPQPEPQP 122
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 566 PGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P PP PPP PP P P PP
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPP 53
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 569 GXXPPXPPPXTXXPPNPGHQPXXXPPTP 652
G PP P P PNPG P PP+P
Sbjct: 924 GFIPPIPVPNPIPKPNPG--PGPGPPSP 949
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 578 PPXPPPXTXXPPNPGHQPXXXPPTP 652
PP PP PP P P PP P
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPP 149
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNP----GHQPXXXPP 646
P TP PP PPP P P G QP P
Sbjct: 135 PPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTP 168
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +2
Query: 443 SXCGDPXXXSPPRXXXXPXTXGR-GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPN- 616
S G P P P G+ G S AQ+ P PG P PP P
Sbjct: 180 SGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGA 239
Query: 617 PGHQPXXXPPTP 652
PG P P
Sbjct: 240 PGGPGQAGAPGP 251
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +2
Query: 443 SXCGDPXXXSPPRXXXXPXTXGR-GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPN- 616
S G P P P G+ G S AQ+ P PG P PP P
Sbjct: 180 SGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGA 239
Query: 617 PGHQPXXXPPTP 652
PG P P
Sbjct: 240 PGGPGQAGAPGP 251
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +2
Query: 443 SXCGDPXXXSPPRXXXXPXTXGR-GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPN- 616
S G P P P G+ G S AQ+ P PG P PP P
Sbjct: 180 SGAGAPGPAGPKGAPGAPGNPGQAGAPGQPGSDAQSESSPGAPGQAGPQGPPGPAGSPGA 239
Query: 617 PGHQPXXXPPTP 652
PG P P
Sbjct: 240 PGGPGQAGAPGP 251
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -2
Query: 867 DP-GXXXXGGGXRXXGGXGXGGGGXG 793
DP G GGG GG G GGGG G
Sbjct: 705 DPWGGSRWGGGRGGWGGGGWGGGGWG 730
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQPXXXPP 646
P PG P PPP PP G P P
Sbjct: 710 PGIPGYPPAPPPPGVGPPPPQGIPPMGFDP 739
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +2
Query: 521 NPXTSXAQARXHPXTPGXXPPXPPPXTXXPP----NPGHQPXXXPPTP 652
+P + P TPG P PP PP PGH P P
Sbjct: 205 SPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGP 252
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 26.2 bits (55), Expect(2) = 6.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 864 PGXXXXGGGXRXXGGXGXGGGGXGGC 787
PG GG G G GGG GGC
Sbjct: 19 PGLLNIFGGAGGGGCGGCGGGCGGGC 44
Score = 21.0 bits (42), Expect(2) = 6.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 807 GGGXGGCXR 781
GGG GGC R
Sbjct: 55 GGGCGGCGR 63
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG R GG G GGGG GG
Sbjct: 161 GGGGRGGGG-GRGGGGGGG 178
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Frame = +2
Query: 458 PXXXSPPRXXXXPXTXGR-GXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNPGHQPX 634
P PP P G G Q P TPG P PP PP P
Sbjct: 218 PGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPG 277
Query: 635 XXPPTP 652
P P
Sbjct: 278 SSQPGP 283
>AF016427-10|AAB65348.1| 301|Caenorhabditis elegans Hypothetical
protein F32D1.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 557 PXTPGXXPPXPPPXTXXPPNPGHQP 631
P T G PP PPP P G+QP
Sbjct: 182 PSTSGPPPPRPPPAGHQNPFLGNQP 206
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/65 (27%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +2
Query: 470 SPPRXXXXPXTXGRGXRNPXTSXAQARXHPX----TPGXXPPXPPPXTXXPPNPGHQPXX 637
+PP+ RG R QA T P PPP PP P
Sbjct: 1295 APPKNSSKKRNNRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPPPPPPSDDLTP 1354
Query: 638 XPPTP 652
PP P
Sbjct: 1355 VPPPP 1359
>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
protein R08B4.1a protein.
Length = 1137
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GG G GG
Sbjct: 799 GGGGNGGGGNGGGGNGNGG 817
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGG GG
Sbjct: 114 GRGGNGGGRGGTGGFGDNGGGRGG 137
>U61288-1|AAB17543.1| 790|Caenorhabditis elegans CE protein.
Length = 790
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 846 GGGXRXXGGXGXGGGGXGG 790
GGG GG G GG G GG
Sbjct: 452 GGGGNGGGGNGGGGNGNGG 470
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXTPGXXPPXPPPXTXXPPNP 619
G P PP P GR P R PG PP PP PP P
Sbjct: 111 GPPGPPGPPGRDGRPGAPGR----PGNPGPPGRDGALLPG--PPPKPPCQKCPPGP 160
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G G GG GG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGG 75
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G G GG GG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGG 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G GGG GG
Sbjct: 71 GGFGGGGGGNYGGGGGNQGGGGGG 94
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG GGGG GG
Sbjct: 72 GFGGGGGGNYGGGGGNQGGGGGGG 95
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G G GG GG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGG 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G G GG GG
Sbjct: 62 GGGGFGGGNGGFGGGGGGSGGGGG 85
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 861 GXXXXGGGXRXXGGXGXGGGGXGG 790
G GGG GG G G GG GG
Sbjct: 52 GGGGGGGGGGGGGGFGGGNGGFGG 75
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.6
Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 10/77 (12%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGXRNPXTSXAQARXHPXT--------PGXXPPXPPPXTXX 607
G+P SPP P G R + P PG P P
Sbjct: 208 GNPGYTSPPGLPGPPGPCGEAGREGPNGTPGLKGEPGNNSIRQISLPGRKGPPGLPGQCG 267
Query: 608 PPN-PGHQPXXXPP-TP 652
PP PG+ P PP TP
Sbjct: 268 PPGPPGYTPPPGPPGTP 284
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 8/68 (11%)
Frame = +2
Query: 452 GDPXXXSPPRXXXXPXTXGRGX-RNPXTSXAQARXHPXTPGXXPPXP-------PPXTXX 607
GD P P GRG R+ T A R P P P P P
Sbjct: 176 GDAGSPGQPGHPGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSGGAGTPGPQG 235
Query: 608 PPNPGHQP 631
PP P QP
Sbjct: 236 PPGPSGQP 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,843,022
Number of Sequences: 27780
Number of extensions: 94762
Number of successful extensions: 2199
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1686
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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