Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F15
         (854 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g49320.1 68416.m05392 expressed protein contains Pfam profile...    29   3.9  
At3g51710.1 68416.m05670 curculin-like (mannose-binding) lectin ...    29   5.2  
At5g35170.1 68418.m04168 adenylate kinase family protein contain...    28   9.1  
At4g18570.1 68417.m02749 proline-rich family protein common fami...    23   9.7  

>At3g49320.1 68416.m05392 expressed protein contains Pfam profile
           PF03690: Uncharacterised protein family (UPF0160)
          Length = 354

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 480 SXVWDLDXNTRLSAGGMVSKEFGHRRPDVGVQAEFRH 590
           S V+ L  NT+LS+ G+V K +G       +Q E RH
Sbjct: 100 SEVFGLGFNTKLSSAGLVYKHYGLEIISKELQLEQRH 136


>At3g51710.1 68416.m05670 curculin-like (mannose-binding) lectin
           family protein / PAN domain-containing protein contains
           Pfam profiles: PF01453 lectin (probable mannose
           binding), PF00024 PAN domain
          Length = 476

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 788 FYFTCXLIKQIXXPXPXPPPPP 853
           FYF     K +  P P PPPPP
Sbjct: 445 FYFIRKRRKSLLLPPPPPPPPP 466


>At5g35170.1 68418.m04168 adenylate kinase family protein contains
           Pfam profile: PF00406 adenylate kinase
          Length = 588

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -1

Query: 314 IIEDL-SVVTGFTKKPIIVLAQRAEDLPSS 228
           II+DL ++ T   K+P++++  R +DLP+S
Sbjct: 453 IIDDLQAMTTAAGKRPVVLINPRLKDLPAS 482


>At4g18570.1 68417.m02749 proline-rich family protein common family
           members: At3g25690, At4g04980, At5g61090 [Arabidopsis
           thaliana]
          Length = 642

 Score = 23.0 bits (47), Expect(2) = 9.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +2

Query: 812 KQIXXPXPXPPPP 850
           K I  P P PPPP
Sbjct: 307 KSIPPPPPPPPPP 319



 Score = 23.0 bits (47), Expect(2) = 9.7
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 827 PXPXPPPPP 853
           P P PPPPP
Sbjct: 334 PPPPPPPPP 342


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,890,557
Number of Sequences: 28952
Number of extensions: 391387
Number of successful extensions: 3481
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2078
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)