Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F14
(972 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.004
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.32
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.57
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.57
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.0
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 26 7.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.3 bits (90), Expect = 4e-04
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2
Query: 875 PPPPPXXXXPPPPPXPXXLPXXXPXXPPPXXP 970
PPP P PPPPP P + P PPP P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +2
Query: 875 PPPPPXXXXPPPPPXPXXLPXXXP--XXPPPXXP 970
PPPPP P P P P +P P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPX-----PPPPPXPP 972
PP P P P P PPPPP PP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPPXPP 972
PPPP P PPPPP PP
Sbjct: 762 PPPPPPPGVAGAGP---PPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 11/36 (30%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXP-----------PPPPXPP 972
PPPP +P P P P PPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.2 bits (55), Expect(2) = 0.62
Identities = 16/53 (30%), Positives = 17/53 (32%), Gaps = 5/53 (9%)
Frame = +1
Query: 643 APPPXXGARXXP-----PXPXPHXXXXFXXXXPXXGXGXXXXXXSPPXPPPPP 786
+PPP A P P P P P PP PPPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 901 PPPXXXSXXSPXPXPXPPPPPXP 969
PPP + P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPP 754
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 646 PPPXXGARXXPPXPXPHXXXXFXXXXPXXGXGXXXXXXSPPXPPPPPXP 792
PPP P P P P + P PPPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 22.6 bits (46), Expect(2) = 7.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 474 SPPPPPP 454
SPPPPPP
Sbjct: 731 SPPPPPP 737
Score = 21.8 bits (44), Expect(2) = 0.62
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPPXP 969
PPPP + S P P P P
Sbjct: 780 PPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 21.4 bits (43), Expect(2) = 7.9
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -1
Query: 471 PPPPPPXX*XKKPXXXGGGEXXXXXXKPAGXVXPXPPPXKKXGGXKXXXXXP 316
PPPPPP P G G P PPP GG + P
Sbjct: 761 PPPPPP-----PPGVAGAGPPP----------PPPPPPAVSAGGSRYYAPAP 797
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.1 bits (82), Expect = 0.004
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 875 PPPPPXXXXPPPPPXPXXLPXXXPXXPPPXXP 970
P PPP PPPP +P P PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.99
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +3
Query: 873 PPPPPPXXPXPPXXXXXLXSXPXXPXXPPP 962
PPPPP P PP P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 884 PPXXXXPPPPPXPXXLPXXXPXXPPPXXP 970
PP P PPP P +P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +2
Query: 878 PPPPXXXXPPPPPXPXXLPXXXPXXP--PPXXP 970
PP PPPPP P P P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 901 PPPXXXSXXSPXPXPXPPPPPXPP 972
PP P P PPPP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 9.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 873 PPPPPPXXPXPPXXXXXLXSXPXXPXXPPPXXP 971
P PPPP PP S P P PP P
Sbjct: 1705 PTPPPPPMSVPPP-----PSAPPMPAGPPSAPP 1732
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 887 PXXXXPPPPPXPXXLPXXXPXXPPP 961
P PPPPP P P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.1 bits (67), Expect = 0.25
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 884 PPXXXXPPPPPXPXXLPXXXPXXPPP 961
PP PPPPP P P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.25
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPP 963
PPPP P P PPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 2/18 (11%)
Frame = +2
Query: 875 PPPPPXXXXPP--PPPXP 922
PPPPP PP PPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPP 28
Score = 22.2 bits (45), Expect(2) = 9.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 471 PPPPPPXX*XKK 436
PPPPPP KK
Sbjct: 24 PPPPPPPGYVKK 35
Score = 21.4 bits (43), Expect(2) = 9.7
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -1
Query: 474 SPPPPPP 454
+PPPPPP
Sbjct: 8 NPPPPPP 14
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.32
Identities = 29/126 (23%), Positives = 32/126 (25%), Gaps = 2/126 (1%)
Frame = +1
Query: 598 PPXXPXKXXXXFXSXAPPPXXGARXX--PPXPXPHXXXXFXXXXPXXGXGXXXXXXSPPX 771
PP P + PPP +R PP P P P G +PP
Sbjct: 361 PPPPPPRSAPS-TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS--TPPV 417
Query: 772 PPPPPXPXXXXLXXXXFXXXXXXXXXXXXXXXXXXXXXXXXXPPPPXXXSXXSPXPXPXP 951
P PP P PP P P P P
Sbjct: 418 PTPPSLPPSAP---PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 952 PPPPXP 969
PPP P
Sbjct: 475 APPPAP 480
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 878 PPPPXXXXPPPPPXPXXLPXXXPXXPP 958
P PP PPPP P P PP
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 875 PPPPPXXXXPPPPPXP 922
PP PP PPP P P
Sbjct: 467 PPLPPAAPAPPPAPAP 482
Score = 22.6 bits (46), Expect(2) = 6.8
Identities = 19/76 (25%), Positives = 21/76 (27%), Gaps = 10/76 (13%)
Frame = +1
Query: 583 RAXGRPPXXPXKXXXXFXSXAPPPXXGA----------RXXPPXPXPHXXXXFXXXXPXX 732
R G+PP PPP A R PP P P P
Sbjct: 320 RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Query: 733 GXGXXXXXXSPPXPPP 780
+PP PPP
Sbjct: 380 SSS--RAVSNPPAPPP 393
Score = 21.8 bits (44), Expect(2) = 6.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 901 PPPXXXSXXSPXPXPXPPPPPXPP 972
PP S P P PP PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPP 451
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.57
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 901 PPPXXXSXXSPXPXPXPPPPPXPP 972
PP P P P PPPPP P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLP 247
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPPXP 969
P P + P P PPPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPPXPP 972
PP + P PPPPP PP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPP 197
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 972 RGXXGGGXXGXXXGRXXGXGGGGGXXXXGGGG 877
RG GG G GR GGG G G GG
Sbjct: 18 RGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 970 GXXGGGXXGXXGXEXXXXXXXGGXGXXGGGGGG 872
G GGG G G GG G GG GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 969 GXXGGGXXGXXXGRXXGXGGGGGXXXXGGGGG 874
G GG G G G GG GG GG GG
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGG--ARGGRGG 59
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -1
Query: 969 GXXGGGXXGXXXGRXXGXGG-GGGXXXXGGGGG 874
G GG G G G GG GGG GGG G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 957 GGXXGXXXGRXXGXGG-GGGXXXXGGGGG 874
GG G G G GG GGG GGG G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPG 266
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -1
Query: 957 GGXXGXXXGRXXGXGG-GGGXXXXGGGGG 874
GG G G G GG GGG GGG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 3/34 (8%)
Frame = +2
Query: 878 PPPPXXXXPPP---PPXPXXLPXXXPXXPPPXXP 970
PP P P P PP P P PPP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 876 PPPPPXXPXPPXXXXXLXSXPXXPXXPPP 962
PP P P P S P P PPP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPP 152
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPPXPP 972
PP P S P P P PP PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 875 PPPPPXXXXPPPPPXPXXLPXXXPXXPPPXXP 970
PP PP PP P +P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPP 963
PPPP S +P P P PP
Sbjct: 420 PPPPISSSSTTPRPDDKPSLPP 441
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 7.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 898 PPPPXXXSXXSPXPXPXPPPPP 963
PPPP S + P PPPP
Sbjct: 908 PPPPPTASMTASAPAIASPPPP 929
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,108,894
Number of Sequences: 5004
Number of extensions: 30881
Number of successful extensions: 595
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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