Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F11
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    27   0.25 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    27   0.25 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   4.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   4.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   7.1  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 460 RTHTRQSNASARPRAERRGSHACPTSSHMRTHIG 359
           RTH+ +      P  +RR S +   ++HMRTH G
Sbjct: 42  RTHSGEKPFRC-PVCDRRFSQSSSVTTHMRTHSG 74


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 460 RTHTRQSNASARPRAERRGSHACPTSSHMRTHIG 359
           RTH+ +      P  +RR S +   ++HMRTH G
Sbjct: 298 RTHSGEKPFRC-PVCDRRFSQSSSVTTHMRTHSG 330


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 694 LLFVLFSI*RLYLSCIFF-GRLLYF 623
           ++FV FS+    L C+FF G +L F
Sbjct: 221 IVFVCFSLVEDTLPCVFFLGSILIF 245


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 250 YDLGGLLLQMSAAAARPTAVLSH 318
           +D  GLLL  + AAA P+  LS+
Sbjct: 172 WDQHGLLLTAAVAAAGPSVDLSY 194


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 441 PTPAPGRGRSAAVRTRAPLLAIC 373
           P   PG  +   V T+APL  +C
Sbjct: 105 PKAKPGERKFIKVTTKAPLECMC 127


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 167 CIVVRAQLHTSEPRPSLLLPTVL 235
           CI V A+   S+    LLLPTVL
Sbjct: 506 CINVLAEACGSDITTRLLLPTVL 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,226
Number of Sequences: 336
Number of extensions: 4295
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)