Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F11
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 65 8e-11
11_04_0097 + 13448740-13450725 32 0.50
10_08_0075 - 14676835-14677173,14677776-14678426,14678734-146789... 31 1.2
10_06_0036 - 9914606-9915561,9916287-9916368 25 1.2
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 31 1.5
10_07_0148 + 13413078-13414295 30 2.0
05_03_0517 - 14936085-14936867 30 2.7
05_01_0137 + 917533-917814,918080-918352 29 3.6
04_04_0016 - 22167780-22167873,22167978-22168272,22168380-221684... 29 3.6
12_01_0671 - 5702051-5702159,5702493-5703216,5703910-5704476,570... 29 4.7
06_03_1225 + 28538515-28538721,28538799-28539000,28539241-285394... 29 4.7
01_03_0113 - 12647599-12648052,12648078-12648319 29 4.7
05_03_0657 + 16694833-16694963,16695567-16695684,16696280-166963... 29 6.2
03_06_0072 - 31469595-31469684,31469762-31469848,31469968-314700... 29 6.2
01_01_0077 - 585670-585787,585921-586687 29 6.2
02_04_0005 - 18843061-18843201,18843309-18843440,18844457-188453... 28 8.2
01_06_0780 - 31938064-31938127,31940191-31941743 28 8.2
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 64.9 bits (151), Expect = 8e-11
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 444 WRVWVRGANGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASIEIPIXIYL 623
W V+VR A D+S V ++VF+LHPS F P RV+ PP+E+ E G EI I +Y
Sbjct: 109 WTVYVRSATNEDLSVIVKRVVFQLHPS--FTNPTRVVEQPPFELSESGWGEFEIAITLYF 166
Query: 624 KYSSRPKKIQLKYSLQI 674
K++ L + L++
Sbjct: 167 HSDVCEKRLDLFHQLKL 183
>11_04_0097 + 13448740-13450725
Length = 661
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 211 FASPANCAPWLSTYDLGGLLLQMSAAAARPTAVLSHFRK*LKAHSCIM 354
F + A+ AP ++TY+L LLQ RP L HFR LK S ++
Sbjct: 162 FVTQASVAPTVATYNL---LLQAYCDCRRPDTALEHFRLLLKDDSPVL 206
>10_08_0075 -
14676835-14677173,14677776-14678426,14678734-14678948,
14679510-14679783,14680249-14680410
Length = 546
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 49 PASVSEVRAFGDSVINKPPQCLHVRYAGL--NSTLERRAGSMYRSPRPTPHK*AASF-AS 219
PA + RA +V+ +PP C + AGL + R R P P +AS +S
Sbjct: 8 PALQAYTRAV--AVLAQPPACARLAVAGLVAQPPVHARLAVAGRGVAPPPENESASGESS 65
Query: 220 PANCAPWLSTYDLGG 264
P+ P + T D+GG
Sbjct: 66 PSTVPPDVETDDIGG 80
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 137 IPPWNAEPAPCIVVRAQLHTSEPRPSLLLPTVLPGSPHMTSVASCCRCQPPPHA 298
+PP A P+ +VV P P+ P +P +P + C PP A
Sbjct: 193 VPPAAAPPSTPVVV-------VPAPATSPPMSMPATPPEAAAGGMAPCSAPPTA 239
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 404 TAALRPRPGAGVGLARVGAWC 466
TAA+ P+P +G G G WC
Sbjct: 238 TAAMSPQPCSGEGGNGGGQWC 258
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +3
Query: 453 WVRGA-----NGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASI 599
WVR A NGR + A + K+V+R H S + P V+ Y+ G A I
Sbjct: 63 WVRVAEVGRWNGRHVYAMLAKVVYRFHVSIDYYLPYMVIKSVLYKSDVQGLALI 116
>10_07_0148 + 13413078-13414295
Length = 405
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 158 PAPCIVVRAQLHTSEP-RP-SLLLPTVLPGSPHMTSVASCCRCQPPPHA 298
PA + VR Q H + RP LL V + +++VA+ CR PPP A
Sbjct: 337 PAAAVAVRQQQHRRQADRPVGLLAGCVSHRAVDVSAVAAVCRPPPPPGA 385
>05_03_0517 - 14936085-14936867
Length = 260
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -2
Query: 484 LMSRPLAPRTHTRQSNASARPRAERRGSHACPTSSHMRT 368
L RP+ R + + ASA PR GS CP+S MR+
Sbjct: 126 LQLRPIRTRPPSAAA-ASAEPRRTASGSGTCPSSPRMRS 163
>05_01_0137 + 917533-917814,918080-918352
Length = 184
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 194 TSEPRPSLLLPTVLPGSPHMTSVASCCRCQPPP 292
TS P P+ T P P + C RC PPP
Sbjct: 56 TSSPAPTTTTTTSPPPPPSFRRRSFCRRCTPPP 88
>04_04_0016 -
22167780-22167873,22167978-22168272,22168380-22168455,
22168665-22168853,22168955-22169176,22169315-22169413,
22169502-22169582,22169753-22170060,22171611-22171950,
22172047-22172110,22172191-22172412,22172865-22173043
Length = 722
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 423 GRALALDWRVWVRGANGRDISAFVHKI 503
GR A+ W VWVR GR + AF ++
Sbjct: 158 GRVEAVRWLVWVRLYRGRKVMAFFKRV 184
>12_01_0671 -
5702051-5702159,5702493-5703216,5703910-5704476,
5704654-5704873,5705303-5707207
Length = 1174
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -3
Query: 276 LQQEATEVICGEPGSTVGRRSEGRGSLVWSWARTTIHG 163
L+++ + ++CG T+ R+ GSL W ++T+ HG
Sbjct: 299 LRRKGSGLLCGS--QTLHRKKRSFGSLKWGHSKTSAHG 334
>06_03_1225 +
28538515-28538721,28538799-28539000,28539241-28539472,
28539560-28539713,28539792-28540136
Length = 379
Score = 29.1 bits (62), Expect = 4.7
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = -1
Query: 248 VESQGAQLAGEAKDAAHLCGVGRGLRYMEPALRSRVEFKPAYRTCRH*GGLFITESPKAR 69
+E QG + +DA H+ GR ++PAL E P C L E P R
Sbjct: 252 MEKQGDTVGNLIRDAWHMWRDGRLHELVDPALCDEYE-SPVIMRCTQVALLCAQEDPTER 310
Query: 68 TSLTE 54
++T+
Sbjct: 311 PTMTD 315
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +2
Query: 194 TSEPRPSLLLPTVLPGSPHMTSVASCCRCQPPPHALRR 307
+S P P P+ SP TS AS R PPP ALRR
Sbjct: 42 SSPPPPPASPPSA--ASPPATSTASRSRTCPPPLALRR 77
>05_03_0657 +
16694833-16694963,16695567-16695684,16696280-16696376,
16700126-16700232,16700473-16700595,16700791-16700944,
16701237-16701297,16701417-16701781,16701875-16703483,
16703697-16703940
Length = 1002
Score = 28.7 bits (61), Expect = 6.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -3
Query: 201 SLVWSWARTTIHGAGSAFQGGI 136
+L+WSW ++ + G G F+G +
Sbjct: 662 ALIWSWDQSVVGGLGGKFEGNL 683
>03_06_0072 -
31469595-31469684,31469762-31469848,31469968-31470036,
31470117-31470185,31470269-31471306
Length = 450
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 482 DVASIGTTHPHA-PVQRQRPAEGGAPRFARVP 390
DVA T P A PV R +PA +PR A VP
Sbjct: 187 DVAKAPTAAPAATPVSRTKPAPAPSPRPAHVP 218
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 459 APTRASPTPAPGRGRSAAVRTRAPLLA 379
AP S TPAP R + AA AP +A
Sbjct: 43 APAILSATPAPSRAQEAAAAAAAPCIA 69
>02_04_0005 -
18843061-18843201,18843309-18843440,18844457-18845315,
18845884-18845973,18846748-18846869,18846950-18847049,
18847151-18847205,18847275-18847365,18847453-18847572,
18847681-18847780,18847890-18848018,18848099-18848201,
18848670-18848743,18848848-18848933,18849297-18849358,
18849454-18849541,18849937-18850029
Length = 814
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +2
Query: 203 PRPSLLLPTVL--PGSPHMTSVASCCRCQPPP 292
P L+P +L P PH T++ C PPP
Sbjct: 642 PPTEQLIPMLLYPPAKPHTTAIVKGSTCYPPP 673
>01_06_0780 - 31938064-31938127,31940191-31941743
Length = 538
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 126 CRFEFHPGTQSRLHVS*SAPNSTQVSRVLRFSCQL 230
C E PG Q +H APN T VS + S L
Sbjct: 488 CNMELKPGMQHLVHQMLPAPNGTPVSEKVERSSSL 522
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,050,723
Number of Sequences: 37544
Number of extensions: 603175
Number of successful extensions: 2407
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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