Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F11
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77667-2|CAB01234.1|  211|Caenorhabditis elegans Hypothetical pr...    46   5e-05
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr...    33   0.34 
AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical...    29   5.5  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    28   9.7  
AC024202-11|AAF36030.1|  341|Caenorhabditis elegans Hypothetical...    28   9.7  

>Z77667-2|CAB01234.1|  211|Caenorhabditis elegans Hypothetical
           protein M04B2.3 protein.
          Length = 211

 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = +3

Query: 444 WRVWVRGANGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASIEIPIXIY 620
           W V+++     D + ++ K+ F+LH S  +  P RV+  PPYE+ E G    EI I IY
Sbjct: 39  WTVFLKPYLIEDPTKWIRKVQFKLHES--YAVPYRVVEKPPYEVTETGWGEFEIQIRIY 95


>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
           protein F52H3.7a protein.
          Length = 1245

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 503 DLVNESTDVASIGTTHPHAPVQRQRPAEGGAPRFARVPH 387
           D V+E T + S   TH  APV    PAE  A      PH
Sbjct: 467 DKVHEETKIDSAAETHADAPVVDASPAEDQASEVTEAPH 505


>AC084197-38|AAU87807.1|  186|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.43 protein.
          Length = 186

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = -1

Query: 365 HRCIMMQ-E*AFSHFLKCDKTAVGRAAAADICNKRPPRSYVESQGAQLAGEAKDAAHL 195
           +RC  M  E A    L+C +T   R   AD+ + R PR ++E +   LA ++    HL
Sbjct: 30  NRCKKMDNEKALRFELECRRTGKCREIVADVQHSRMPR-HMEQEACSLAAKSIMTYHL 86


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 472  PLAPRTHTRQSNASARPRAERRGSHACPTSSHMRTH 365
            P+ P  H R +  S +PR  R  SH   TS  +  H
Sbjct: 1588 PITPSRHVRTAANSPQPRHRRSDSHFSMTSLPLIAH 1623


>AC024202-11|AAF36030.1|  341|Caenorhabditis elegans Hypothetical
           protein Y71H2B.2 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/19 (73%), Positives = 14/19 (73%)
 Frame = +3

Query: 273 ADVSRRRTPYGGFITF*KM 329
           AD SRRRTP G FIT  KM
Sbjct: 247 ADGSRRRTPGGVFITLFKM 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,322,444
Number of Sequences: 27780
Number of extensions: 422276
Number of successful extensions: 1212
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)