Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F11
(851 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g45600.1 68418.m05603 YEATS family protein contains Pfam doma... 62 6e-10
At2g18000.1 68415.m02092 YEATS family protein contains Pfam doma... 60 2e-09
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 32 0.56
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 32 0.56
At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger) fa... 31 0.97
At3g02210.1 68416.m00202 phytochelatin synthetase family protein... 29 3.0
At5g02010.1 68418.m00120 expressed protein contains Pfam profile... 29 5.2
At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family... 29 5.2
At5g60790.1 68418.m07627 ABC transporter family protein similar ... 28 9.1
At4g12300.1 68417.m01948 cytochrome P450 family protein flavonoi... 28 9.1
At1g73470.1 68414.m08505 expressed protein 28 9.1
>At5g45600.1 68418.m05603 YEATS family protein contains Pfam domain
PF03366: YEATS family
Length = 268
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +3
Query: 444 WRVWVRGANGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASIEIPIXIYL 623
W V+VRGA DIS V K+VF+LH S+F P RV+ PP+E+ E G EI + ++
Sbjct: 69 WAVYVRGATNEDISVVVKKVVFQLH--SSFNSPTRVIEEPPFEVSESGWGEFEIAMTLHF 126
Query: 624 KYSSRPKKIQLKYSLQI 674
K + L + L++
Sbjct: 127 HSDVCDKPLSLYHHLKL 143
>At2g18000.1 68415.m02092 YEATS family protein contains Pfam domain
PF03366: YEATS family
Length = 202
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +3
Query: 444 WRVWVRGANGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASIEIPIXIYL 623
W V+VRGA D+ + +++F LHPS F P RV+ PP+ + E G +I I ++
Sbjct: 65 WTVYVRGATNEDLGVVIKRVIFHLHPS--FNNPTRVVDAPPFALSECGWGEFKIDITVFF 122
Query: 624 KYSSRPKKIQLKYSLQI 674
KK++L + L++
Sbjct: 123 HTDVCEKKLELSHVLKL 139
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 223 QEKRRTRLTCVELGADYDTWSRLCVPGWNSNLHIGHVG 110
Q+ R R++C+ L AD S LC W+SNL I G
Sbjct: 275 QDSHRNRISCLGLSAD---GSALCTGSWDSNLKIWAFG 309
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 31.9 bits (69), Expect = 0.56
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 223 QEKRRTRLTCVELGADYDTWSRLCVPGWNSNLHIGHVG 110
Q+ R R++C+ L AD S LC W+SNL I G
Sbjct: 337 QDSHRNRISCLGLSAD---GSALCTGSWDSNLKIWAFG 371
>At1g68180.1 68414.m07788 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 248
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 114 TCPICRFEFHPGTQSRLHVS*SAPNSTQVSRVLRFSCQLCSL 239
TCPICRFE + G S +V + R RF ++CSL
Sbjct: 174 TCPICRFEVNLGV-SESNVDEGGSYNIDNDRSNRFRTRVCSL 214
>At3g02210.1 68416.m00202 phytochelatin synthetase family protein /
COBRA cell expansion protein COBL3 similar to
phytochelatin synthetase [Hordeum vulgare subsp.
vulgare] GI:29570314; identified in Roudier, et al,
Plant Phys. (2002) 130:538-548 (PMID:12376623);
supported by cDNA: gi|26452134|dbj|AK118555.1; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 452
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 191 HTSEPRPSLLLPTVLPGSPHMTSVASCCR 277
H + PS++ +LPGSP+ +A+CCR
Sbjct: 112 HCCKKTPSVV--DLLPGSPYNQQIANCCR 138
>At5g02010.1 68418.m00120 expressed protein contains Pfam profile
PF03759: Domain of unknown function (DUF315)
Length = 546
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +2
Query: 617 IPEIQQSAKEDTT*IQSSDREQHEEQXPSLVASTTTS 727
+PE+++ +E + + R++ EEQ PS T S
Sbjct: 8 LPEVEEKGRESSCCSSETTRQEEEEQSPSCTEDFTAS 44
>At3g56590.1 68416.m06293 hydroxyproline-rich glycoprotein family
protein
Length = 477
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/69 (24%), Positives = 26/69 (37%)
Frame = -1
Query: 455 PHAPVQRQRPAEGGAPRFARVPHF*PYAHTHRCIMMQE*AFSHFLKCDKTAVGRAAAADI 276
PH+P P+ P + PH P+ H H + E + S K A + +
Sbjct: 313 PHSPATSSTPSPSPQPETHQYPHHHPHHHHHHHELAPEPSLSPPTKGFAPASAPTKHSPL 372
Query: 275 CNKRPPRSY 249
+ PP Y
Sbjct: 373 PPRNPPCPY 381
>At5g60790.1 68418.m07627 ABC transporter family protein similar to
ABC transporter homolog PnATH GI:7573600 from [Populus
nigra]
Length = 595
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 438 LDWRVWVRGANGRDISAFVHKIVFRLHPSSAFVXPKRVLXXPPYEIQEXGCASIEIPIXI 617
LD RV + G NG S + + LHP+ V L Y +E+P +
Sbjct: 405 LDSRVALVGPNGAGKSTLLKLMTGELHPTEGMVRRHNHLKIAQYHQHLAEKLDLELPALL 464
Query: 618 YL 623
Y+
Sbjct: 465 YM 466
>At4g12300.1 68417.m01948 cytochrome P450 family protein flavonoid
3',5'-hydroxylase - Campanula medium, PID:d1003951
Length = 516
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 235 PWLSTYDLGGLLLQMSAAAARPTAVL 312
PWL+ +DL GL+ +M A AVL
Sbjct: 235 PWLARFDLQGLVKRMGVCARELDAVL 260
>At1g73470.1 68414.m08505 expressed protein
Length = 351
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +2
Query: 524 LGFCLXKKSA---PXASVRDPRVRLRFDRNTDSXIPEIQQ 634
LGF L +A P + DP +RL F+ TDS + E+++
Sbjct: 40 LGFALASTAASESPSEATYDPELRLVFELATDSELYELEK 79
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,355,080
Number of Sequences: 28952
Number of extensions: 401262
Number of successful extensions: 1306
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1980143200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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