Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F09
         (879 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071295-1|AAL48917.1|  227|Drosophila melanogaster RE32624p pro...    29   8.5  
AE014134-2694|AAF53519.1|  227|Drosophila melanogaster CG5861-PA...    29   8.5  

>AY071295-1|AAL48917.1|  227|Drosophila melanogaster RE32624p
           protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -1

Query: 366 LKNYFSGFRCFR--GLQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTLSQR 193
           L  Y + ++C +  G+ IF + V+ +      + ++    G FNFF + L C +      
Sbjct: 25  LSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFYSDAPSSSGEFNFFAEILRCSMDIADLL 84

Query: 192 IYAIVFFR 169
            +A++  R
Sbjct: 85  GFALILSR 92


>AE014134-2694|AAF53519.1|  227|Drosophila melanogaster CG5861-PA
           protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -1

Query: 366 LKNYFSGFRCFR--GLQIFIKFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTLSQR 193
           L  Y + ++C +  G+ IF + V+ +      + ++    G FNFF + L C +      
Sbjct: 25  LSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFYSDAPSSSGEFNFFAEILRCSMDIADLL 84

Query: 192 IYAIVFFR 169
            +A++  R
Sbjct: 85  GFALILSR 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,803,449
Number of Sequences: 53049
Number of extensions: 559117
Number of successful extensions: 1563
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)