Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F08
         (830 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    26   0.42 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.42 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   5.2  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -1

Query: 596 ICXRFIXYYHNXXKLHYIASLKYISAHVYLITLM 495
           IC  ++  YH      +   LKY    +Y++T++
Sbjct: 21  ICDSYLKIYHKEKYRKFCRILKYFIIAIYVLTIL 54


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
 Frame = +2

Query: 611 YKVHLLI*XYMFYSNG----CLRXSDFRFFFFCVYLYLIFSLGYLTKPVFITM 757
           + VH L+  Y FY       C+    + F  F V+L  +  + Y   P+F  +
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLL 144



 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/36 (22%), Positives = 16/36 (44%)
 Frame = +2

Query: 608 FYKVHLLI*XYMFYSNGCLRXSDFRFFFFCVYLYLI 715
           ++ +HLL    ++Y             F+CV + L+
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILL 236


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 671 SDFRFFFFCVYLYLIFSL 724
           S +   F C+YL+LI +L
Sbjct: 284 SGYTVTFLCLYLFLIITL 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,764
Number of Sequences: 336
Number of extensions: 2990
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)