Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F06
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z70680-2|CAA94573.1|  424|Caenorhabditis elegans Hypothetical
           protein C25G4.4 protein.
          Length = 424

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -1

Query: 198 FAIGTVPAVFLRVDSYNRKHSDQCKSDRKFHDFYS 94
           FA+G  P V  RV S  R    Q K D  F+D  S
Sbjct: 332 FALGIPPVVVHRVQSIERNAYQQRKHDEMFNDIQS 366


>Z46791-5|CAA86755.2|  948|Caenorhabditis elegans Hypothetical
           protein C09G5.6 protein.
          Length = 948

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 175 GGDSPDGEVAPGVDPVKVVDEDHGVNIVDGEPG 273
           G   PDG   PGV     +D + GVN  DG+PG
Sbjct: 429 GERGPDG--TPGVPGEDGIDGEQGVNGQDGQPG 459


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,926,771
Number of Sequences: 27780
Number of extensions: 245268
Number of successful extensions: 523
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)