Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_F04
(860 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 2.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 3.6
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 8.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 8.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 8.4
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 401
LP DS L L V + S V LN++A+ T V + F
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 401
LP DS L L V + S V LN++A+ T V + F
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 401
LP DS L L V + S V LN++A+ T V + F
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 261
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 401
LP DS L L V + S V LN++A+ T V + F
Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAESMPTTSDAVPLIGSYF 329
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQ 449
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQ 449
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQ 449
LP DS L L V + S V LN++A+
Sbjct: 218 LPPDSGEKLTLGVTILLSLTVFLNLVAE 245
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 532 LPADSRACLVLAVAVGRSAIVALNIIAQ 449
LP DS L L V + S V LN++A+
Sbjct: 286 LPPDSGEKLTLGVTILLSLTVFLNLVAE 313
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.0 bits (47), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 691 LQVPVGSETMDAVDSEGHMVAVPVSADSQYQVLVT 587
L+ PVG+E+ V S G + + D + Q+L+T
Sbjct: 38 LERPVGNESEPLVLSFGLTLMQIIDVDEKNQLLIT 72
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 569 KILNTERNQYLVLXVGTNWN 628
++ NT+RN+YL+ N N
Sbjct: 366 RVNNTQRNEYLLALSDRNQN 385
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 245 GEEERSHHKCREQTDTKQQDELHGV 319
GE S + RE ++ D+LH V
Sbjct: 249 GERSCSRDRSREYKKDRRYDQLHNV 273
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 8.4
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = +3
Query: 171 EEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGLQ 350
+EQL S V ++Y + + E ++ +TN+++ + N + N QL L
Sbjct: 475 QEQLTLSKVTSNYHEEFQSLNNAVGEMEATNVTNILS--MDNTQYNLDLSLPQLDSTELA 532
Query: 351 GTSSGIVSQLSSDLS 395
+ LSS LS
Sbjct: 533 DLDISLSENLSSGLS 547
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.8 bits (44), Expect = 8.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 389 LIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 526
L E IK+ ++ + N +G P GDG + SP+ S
Sbjct: 307 LCLTERQIKIWFQNRRMKWKKENKSKGT---PGSGDGDTEISPQTS 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,313
Number of Sequences: 438
Number of extensions: 4135
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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