Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F03
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0372 + 18212948-18213821,18213887-18214030,18214128-182142...    29   3.6  
06_01_0923 + 7129891-7130211,7130610-7131068                           29   6.2  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
04_03_0904 + 20717005-20718087                                         28   8.3  

>12_02_0372 +
           18212948-18213821,18213887-18214030,18214128-18214273,
           18214854-18214862
          Length = 390

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
 Frame = +3

Query: 747 PPXTSITKTHPPSPXVGQXPTRDYKDPXXSPR---KAPP 854
           PP   +T T PP P V   P R    P   P+   K PP
Sbjct: 59  PPQQQLTSTAPPRPIVISEPVRKPTQPHPRPKQPTKPPP 97


>06_01_0923 + 7129891-7130211,7130610-7131068
          Length = 259

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 761 ARXGGAEAXGKNXRQRRXFYGSXAFCWPLAHXFFP-ALSPDSVD 633
           A  GG    GK    R+ FY + A   PL+   FP  +SPD VD
Sbjct: 7   ANGGGGGGQGK--LPRKRFYRARAHSNPLSDSHFPIPISPDEVD 48


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 497 NESAN---ARGEAVCVLGALPLPRSLTRCAR 580
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +2

Query: 671 EPKASKRPXNRKXXAVAXRFFXXPPPPLXEHHKNPPXKSXGGPXP 805
           +PK +  P   K       +   P PP   +HK PP  + G P P
Sbjct: 318 QPKPTPSPYTPKPTPTPPTYTPTPTPP---YHKPPPSYTPGPPPP 359


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,937,505
Number of Sequences: 37544
Number of extensions: 350524
Number of successful extensions: 1031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)