Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_F03
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036373-1|AAH36373.1|  408|Homo sapiens glyceraldehyde-3-phosph...    31   7.1  
AJ005371-1|CAA06501.1|  408|Homo sapiens Glyceraldehyde-3-phosph...    31   7.1  
AF216641-1|AAF87970.1|  408|Homo sapiens spermatogenic cell-spec...    31   7.1  
AC002389-1|AAB64181.1|  417|Homo sapiens GAPDH-2 like protein.         31   7.1  

>BC036373-1|AAH36373.1|  408|Homo sapiens glyceraldehyde-3-phosphate
           dehydrogenase, spermatogenic protein.
          Length = 408

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 671 EPKASKRPXNRKXXAVAXRFFXXPPPPLXEHHKNPPXK 784
           EPKA   P  +            PPPPL  H   PP K
Sbjct: 31  EPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPK 68


>AJ005371-1|CAA06501.1|  408|Homo sapiens Glyceraldehyde-3-phosphate
           dehydrogenase protein.
          Length = 408

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 671 EPKASKRPXNRKXXAVAXRFFXXPPPPLXEHHKNPPXK 784
           EPKA   P  +            PPPPL  H   PP K
Sbjct: 31  EPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPK 68


>AF216641-1|AAF87970.1|  408|Homo sapiens spermatogenic
           cell-specific glyceraldehyde 3-phosphate dehydrogenase-2
           protein.
          Length = 408

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 671 EPKASKRPXNRKXXAVAXRFFXXPPPPLXEHHKNPPXK 784
           EPKA   P  +            PPPPL  H   PP K
Sbjct: 31  EPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPK 68


>AC002389-1|AAB64181.1|  417|Homo sapiens GAPDH-2 like protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 671 EPKASKRPXNRKXXAVAXRFFXXPPPPLXEHHKNPPXK 784
           EPKA   P  +            PPPPL  H   PP K
Sbjct: 31  EPKAEVEPQPQPEPTPVREEIKPPPPPLPPHPATPPPK 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,889,189
Number of Sequences: 237096
Number of extensions: 1968339
Number of successful extensions: 5680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5655
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)