SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E24
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040641-1|AAH40641.1|  636|Homo sapiens hypothetical protein BC...    77   8e-14
AY358497-1|AAQ88861.1|  636|Homo sapiens HYDRL-14 protein.             77   8e-14
AK074855-1|BAC11247.1|  636|Homo sapiens protein ( Homo sapiens ...    77   8e-14
BC011001-1|AAH11001.2|  313|Homo sapiens GLB1L3 protein protein.       77   1e-13
AK074947-1|BAC11309.1|  636|Homo sapiens protein ( Homo sapiens ...    75   4e-13
M34423-1|AAA51823.1|  677|Homo sapiens GLB1 protein.                   72   2e-12
M27507-1|AAA51819.1|  677|Homo sapiens GLB1 protein.                   72   2e-12
M22590-1|AAA51822.1|  677|Homo sapiens GLB1 protein.                   72   2e-12
BT007147-1|AAP35811.1|  677|Homo sapiens galactosidase, beta 1 p...    72   2e-12
BC007493-1|AAH07493.1|  677|Homo sapiens galactosidase, beta 1 p...    72   2e-12
AK223091-1|BAD96811.1|  677|Homo sapiens galactosidase, beta 1 v...    72   2e-12
AK222763-1|BAD96483.1|  677|Homo sapiens galactosidase, beta 1 v...    72   2e-12
AY358639-1|AAQ89002.1|  654|Homo sapiens APKK229 protein.              69   2e-11
AK074703-1|BAC11149.1|  552|Homo sapiens protein ( Homo sapiens ...    61   6e-09
M27508-1|AAA35599.1|  546|Homo sapiens protein ( Human beta gala...    33   1.3  

>BC040641-1|AAH40641.1|  636|Homo sapiens hypothetical protein
           BC008326 protein.
          Length = 636

 Score = 77.0 bits (181), Expect = 8e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YWRDRL K KA GLNT+ TYV W+ HEP   +++F G+ DL  FV  AAE+ L V+LR G
Sbjct: 77  YWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG 136

Query: 706 SLHLC 720
             ++C
Sbjct: 137 P-YIC 140


>AY358497-1|AAQ88861.1|  636|Homo sapiens HYDRL-14 protein.
          Length = 636

 Score = 77.0 bits (181), Expect = 8e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YWRDRL K KA GLNT+ TYV W+ HEP   +++F G+ DL  FV  AAE+ L V+LR G
Sbjct: 77  YWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG 136

Query: 706 SLHLC 720
             ++C
Sbjct: 137 P-YIC 140


>AK074855-1|BAC11247.1|  636|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90374 fis, clone NT2RP2004648, weakly similar to
           Mouse beta-galactosidase (BGAL) gene. ).
          Length = 636

 Score = 77.0 bits (181), Expect = 8e-14
 Identities = 35/65 (53%), Positives = 45/65 (69%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YWRDRL K KA GLNT+ TYV W+ HEP   +++F G+ DL  FV  AAE+ L V+LR G
Sbjct: 77  YWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG 136

Query: 706 SLHLC 720
             ++C
Sbjct: 137 P-YIC 140


>BC011001-1|AAH11001.2|  313|Homo sapiens GLB1L3 protein protein.
          Length = 313

 Score = 76.6 bits (180), Expect = 1e-13
 Identities = 35/65 (53%), Positives = 44/65 (67%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YWRDRL K KA G NTV TYV W+ HEP   +++F G+ DL  FV  AAE+ L V+LR G
Sbjct: 103 YWRDRLLKLKACGFNTVTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPG 162

Query: 706 SLHLC 720
             ++C
Sbjct: 163 P-YIC 166


>AK074947-1|BAC11309.1|  636|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90466 fis, clone NT2RP3002311, weakly similar to
           BETA-GALACTOSIDASE PRECURSOR (EC 3.2.1.23). ).
          Length = 636

 Score = 74.5 bits (175), Expect = 4e-13
 Identities = 34/65 (52%), Positives = 44/65 (67%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YWRDRL K KA GLNT+ TYV W+ HEP   +++F G+ D   FV  AAE+ L V+LR G
Sbjct: 77  YWRDRLLKMKACGLNTLTTYVPWNLHEPERGKFDFSGNLDQEAFVLMAAEIGLWVILRPG 136

Query: 706 SLHLC 720
             ++C
Sbjct: 137 P-YIC 140


>M34423-1|AAA51823.1|  677|Homo sapiens GLB1 protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>M27507-1|AAA51819.1|  677|Homo sapiens GLB1 protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>M22590-1|AAA51822.1|  677|Homo sapiens GLB1 protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>BT007147-1|AAP35811.1|  677|Homo sapiens galactosidase, beta 1
           protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>BC007493-1|AAH07493.1|  677|Homo sapiens galactosidase, beta 1
           protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>AK223091-1|BAD96811.1|  677|Homo sapiens galactosidase, beta 1
           variant protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>AK222763-1|BAD96483.1|  677|Homo sapiens galactosidase, beta 1
           variant protein.
          Length = 677

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 32/65 (49%), Positives = 43/65 (66%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVG 705
           YW+DRL K K AGLN + TYV W++HEP   QY F  D D+  F++ A E+ L V+LR G
Sbjct: 64  YWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPG 123

Query: 706 SLHLC 720
             ++C
Sbjct: 124 P-YIC 127



 Score = 33.5 bits (73), Expect = 0.97
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP---WQCIGVTDCISSKPLVSTQLLRT*NGVTMSPRRN 619
           D F+ DG+P   ISGS+HY R P   W+   +   ++    + T +    N     P + 
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYV--PWNFHEPWPGQY 96

Query: 620 SIISKEIVTW*DLFRQRPKXACTFY*GLGPYICAERDLGXLPVLATRKVS 769
                  V +    R   +         GPYICAE ++G LP     K S
Sbjct: 97  QFSEDHDVEY--FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKES 144


>AY358639-1|AAQ89002.1|  654|Homo sapiens APKK229 protein.
          Length = 654

 Score = 69.3 bits (162), Expect = 2e-11
 Identities = 32/66 (48%), Positives = 41/66 (62%)
 Frame = +1

Query: 523 VYWRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRV 702
           V W DRL K + +GLN +  YV W+YHEP    YNF G RDL+ F+  AA   L V+LR 
Sbjct: 61  VLWADRLLKMRWSGLNAIQFYVPWNYHEPQPGVYNFNGSRDLIAFLNEAALANLLVILRP 120

Query: 703 GSLHLC 720
           G  ++C
Sbjct: 121 GP-YIC 125



 Score = 38.7 bits (86), Expect = 0.026
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP 517
           D+F++DG P   +SGSLHYFR P
Sbjct: 37  DRFLLDGAPFRYVSGSLHYFRVP 59



 Score = 34.7 bits (76), Expect = 0.42
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = +3

Query: 744 PYWLLGKYPNIKLRTTDKDFIXESDIWLK 830
           P WLL K P I LRT+D DF+   D W K
Sbjct: 134 PSWLLRK-PEIHLRTSDPDFLAAVDSWFK 161


>AK074703-1|BAC11149.1|  552|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90222 fis, clone NT2RM1000542, weakly similar to
           BETA-GALACTOSIDASE PRECURSOR (EC 3.2.1.23). ).
          Length = 552

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 28/56 (50%), Positives = 38/56 (67%)
 Frame = +1

Query: 553 KAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTAAEVXLHVLLRVGSLHLC 720
           KA GLNT+ TYV W+ HEP   +++F G+ DL  FV  AAE+ L V+LR G  ++C
Sbjct: 2   KACGLNTLTTYVPWNLHEPERGKFDFSGNLDLEAFVLMAAEIGLWVILRPGP-YIC 56


>M27508-1|AAA35599.1|  546|Homo sapiens protein ( Human beta
           galactosidase-related protein mRNA, complete cds. ).
          Length = 546

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 449 DKFMIDGKPLHIISGSLHYFRGP 517
           D F+ DG+P   ISGS+HY R P
Sbjct: 39  DSFLKDGQPFRYISGSIHYSRVP 61



 Score = 31.5 bits (68), Expect = 3.9
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +1

Query: 526 YWRDRLHKFKAAGLNTVAT 582
           YW+DRL K K AGLN + T
Sbjct: 64  YWKDRLLKMKMAGLNAIQT 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,699,307
Number of Sequences: 237096
Number of extensions: 2314482
Number of successful extensions: 7968
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7968
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -