Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E24
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077544-2|AAK39243.2| 644|Caenorhabditis elegans Hypothetical ... 46 3e-05
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 46 4e-05
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical... 29 4.1
AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical... 29 4.1
AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical... 29 4.1
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 28 7.2
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.2
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.2
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.2
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 28 7.2
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 28 7.2
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 28 9.5
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 28 9.5
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 28 9.5
>AF077544-2|AAK39243.2| 644|Caenorhabditis elegans Hypothetical
protein H22K11.2 protein.
Length = 644
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 529 WRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYN-FEGDRDLVRFVQTAAEVXLHVLLRVG 705
W DRL + +A G N + V W+ H+ + + G+ DLV+F++ A L+ +LR+G
Sbjct: 59 WDDRLKRVRALGFNAITVPVPWNLHQFYQDETPILSGNLDLVKFIKAAESNGLYTILRIG 118
Query: 706 S 708
+
Sbjct: 119 N 119
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 434 ISIVGDKFMIDGKPLHIISGSLHYFRGPWQ 523
I V +F++DG P I+G +HYFR P Q
Sbjct: 28 IDTVNSQFLLDGDPFTYIAGEIHYFRIPHQ 57
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 529 WRDRLHKFKAAGLNTVATYVEWSYHEPXEKQYNFEGDRDLVRFVQTA-AEVXLHVLLRVG 705
W +RL K +A G N + Y+ W+ HE E ++F G D F A + L +LRVG
Sbjct: 75 WDERLGKVRALGFNAIQYYIPWNMHELEEGNHDFSGLLDFAEFSMMAFHKYGLWTILRVG 134
Query: 706 SLHLC 720
++C
Sbjct: 135 P-YIC 138
Score = 35.1 bits (77), Expect = 0.062
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 449 DKFMIDGKPLHIISGSLHYFRGP 517
++F++DG P ISGS+HYFR P
Sbjct: 49 NQFLLDGLPFRYISGSIHYFRIP 71
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 531 PIHCQGPLK*CNDPDMMCRGFPSIINLSPTMLMLC 427
P++CQG CN+P+ C ++ PT L +C
Sbjct: 247 PVYCQGNDNGCNNPNYQCTTMGTLQQCCPTYLFIC 281
>AF047659-14|AAV34788.1| 429|Caenorhabditis elegans Hypothetical
protein K07H8.2c protein.
Length = 429
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 687 VQAYFGRCLNKSHQVTISFEIILFLLGLMVTPFYVR-SNCVETSGFELMQSVTPI 526
V A+FG K+H +I+ +L L++ PF+++ +N E + L TP+
Sbjct: 183 VLAFFGSVFLKAHNTESWLNVIVIVLFLLLLPFWIKIANENEGTQETLYNGWTPV 237
>AF047659-13|AAK82908.1| 503|Caenorhabditis elegans Hypothetical
protein K07H8.2b protein.
Length = 503
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 687 VQAYFGRCLNKSHQVTISFEIILFLLGLMVTPFYVR-SNCVETSGFELMQSVTPI 526
V A+FG K+H +I+ +L L++ PF+++ +N E + L TP+
Sbjct: 257 VLAFFGSVFLKAHNTESWLNVIVIVLFLLLLPFWIKIANENEGTQETLYNGWTPV 311
>AF047659-12|AAC04427.1| 507|Caenorhabditis elegans Hypothetical
protein K07H8.2a protein.
Length = 507
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 687 VQAYFGRCLNKSHQVTISFEIILFLLGLMVTPFYVR-SNCVETSGFELMQSVTPI 526
V A+FG K+H +I+ +L L++ PF+++ +N E + L TP+
Sbjct: 261 VLAFFGSVFLKAHNTESWLNVIVIVLFLLLLPFWIKIANENEGTQETLYNGWTPV 315
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 218 FTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTYSLE 349
F P +G G +SC E F L F+ L +LG SLE
Sbjct: 193 FADTPSNGYIGKNSCPEYTASFLNQLTFQWFSGLAYLGNKKSLE 236
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/99 (24%), Positives = 41/99 (41%)
Frame = +2
Query: 161 ITYLLVEALASDCFSGSRQFTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTY 340
+ +L+V +LA SR + S R + FK + +A+ + FLG
Sbjct: 200 LIFLVVRSLADGKRDASRTIQSLMPSSVRAEVFPGLQRSVFKSAVFLASHIIQVFLGSMK 259
Query: 341 SLEDYAPVVIRVTNEDHQNKLSNEFKMKGHNISIVGDKF 457
S ED+A V + E + + +K IS++ F
Sbjct: 260 SFEDWAFVGLAEDLESTWRRRAIAELLKKFRISVLEQCF 298
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/99 (24%), Positives = 41/99 (41%)
Frame = +2
Query: 161 ITYLLVEALASDCFSGSRQFTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTY 340
+ +L+V +LA SR + S R + FK + +A+ + FLG
Sbjct: 265 LIFLVVRSLADGKRDASRTIQSLMPSSVRAEVFPGLQRSVFKSAVFLASHIIQVFLGSMK 324
Query: 341 SLEDYAPVVIRVTNEDHQNKLSNEFKMKGHNISIVGDKF 457
S ED+A V + E + + +K IS++ F
Sbjct: 325 SFEDWAFVGLAEDLESTWRRRAIAELLKKFRISVLEQCF 363
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/99 (24%), Positives = 41/99 (41%)
Frame = +2
Query: 161 ITYLLVEALASDCFSGSRQFTAAPLSGQRGSSSCVEELIFFKMTLLIATFALLCFLGQTY 340
+ +L+V +LA SR + S R + FK + +A+ + FLG
Sbjct: 265 LIFLVVRSLADGKRDASRTIQSLMPSSVRAEVFPGLQRSVFKSAVFLASHIIQVFLGSMK 324
Query: 341 SLEDYAPVVIRVTNEDHQNKLSNEFKMKGHNISIVGDKF 457
S ED+A V + E + + +K IS++ F
Sbjct: 325 SFEDWAFVGLAEDLESTWRRRAIAELLKKFRISVLEQCF 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,104,344
Number of Sequences: 27780
Number of extensions: 368700
Number of successful extensions: 835
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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