Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E24
         (837 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.65 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   4.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.6  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.1  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   8.1  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 261 HDDDPR*PDNGAAVNCLDPEKQSLASAST 175
           H  DP     G  +NCLDP    LA  +T
Sbjct: 580 HSCDPNLAVYGVWINCLDPNLPKLALFAT 608


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 734 LNLFQHRCKDPTLSRTCKXTS 672
           +N   + CKD T S +CK +S
Sbjct: 96  VNRLVNNCKDITESNSCKKSS 116


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +1

Query: 436 KHRWRQVYD 462
           +HRWRQ+Y+
Sbjct: 381 EHRWRQIYN 389


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 281 FKMTLLIATFALLCFLGQTYSLEDYAPVVIRV 376
           F +  LI  F+++C     YSL D+   + +V
Sbjct: 3   FNIWWLILYFSIVCQAKAHYSLRDFKANIFQV 34


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 392  QNKLSNEFKMKGHNISIVGDKFMIDGKPL 478
            Q+++ +E+        ++G    +DGKPL
Sbjct: 945  QDQIVSEYYQNKPISEVIGGAISLDGKPL 973


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 430 QHKHRWRQVYDRREASTHHI 489
           QH  +W  VY+ +E    HI
Sbjct: 622 QHLDQWNWVYEWKELIPSHI 641


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,428
Number of Sequences: 438
Number of extensions: 4690
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)