Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E23
(902 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0515 - 3864796-3865425 33 0.24
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 32 0.54
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.3
07_01_0080 + 587674-588510 30 2.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.9
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 30 2.9
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 3.8
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983 29 5.1
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 6.7
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 6.7
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 8.8
>03_01_0515 - 3864796-3865425
Length = 209
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P V PPPPP P P P PPPP
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPP 119
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 32.3 bits (70), Expect = 0.54
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
PPPPPG +G P P PPPPG
Sbjct: 424 PPPPPGSYAPVPWGQPPPY--ASYPPPPPG 451
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
PPP P P K PPPPP P P P PPPPG
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPP---PPPKGPSPPPPPPPG 371
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 803 KKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
++ PPPPP P P P PPPP
Sbjct: 89 RRPPPPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPPPP P P P PPPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPPP 121
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXP--PP 895
PPP PR PG G PPPPPG G P P P PP
Sbjct: 350 PPPPPPAAPAAPRPPGPGPG----------PPPPPGAAGRGGGGPPPPALPGGPRARGPP 399
Query: 896 P 898
P
Sbjct: 400 P 400
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
PPPPP P P P PPPPG
Sbjct: 351 PPPPPAAP-----AAPRPPGPGPGPPPPPG 375
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +2
Query: 710 KXXXPPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXP 889
K PPP R P G PPPPP G P P P
Sbjct: 661 KFPAPPPPPPPPRSSSRTPTGAATSS---KGPPPPPPPPLPPANRTNGPGVPSAPPPPPP 717
Query: 890 PPP 898
PPP
Sbjct: 718 PPP 720
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P G+ F PPPPP G PPPP
Sbjct: 640 PPPPSLPNRLVPPPPAPGIGNKFPAPPP--PPPPPRSSSRTPTGAATSSKGPPPPPPPP 696
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXX-KKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + K+ PP PP P P P P PP
Sbjct: 716 PPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPP 775
Query: 899 G 901
G
Sbjct: 776 G 776
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 897 GGGGXXXXGXXGXGXPKXXXXXXPGGGGG 811
GGGG G G G P+ GGGGG
Sbjct: 297 GGGGGGGGGGGGHGAPELGFSGGGGGGGG 325
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPPPP +G P P P PPPP
Sbjct: 111 PPPPPPPHLLHYYGHPPPPPP----PPPP 135
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXP--XXXXPPP 895
PPP + P P GG+ PPPPP P P P PPP
Sbjct: 1100 PPPSIGAGAPPPPPPPGGITG--------VPPPPPIGGLGGHQAPPAPPLPEGIGGVPPP 1151
Query: 896 P 898
P
Sbjct: 1152 P 1152
>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
Length = 448
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 900 PGGGGXXXXGXXGXGXPKXXXXXXPGGGGG 811
PGGGG G G G P GG GG
Sbjct: 325 PGGGGGGFSGGGGGGFPGGGCGGITGGDGG 354
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 900 PGGGGXXXXGXXGXGXPKXXXXXXPGGGGG 811
PGG G G G G P GGGGG
Sbjct: 52 PGGRGGGYGGGGGGGGPPYYGGGGGGGGGG 81
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 809 TPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
TP PPP G P P PPPP
Sbjct: 12 TPSPPPFSSRPRVVGPPPPPPSDPPPPPPP 41
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPP 895
PPP P P GV PPPPP P P P PPP
Sbjct: 83 PPPPQMYYQPPPPPPPYGVN-------SSQPPPPPPPPPSPPPSAPPPPPPPPTQPPP 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,517,076
Number of Sequences: 37544
Number of extensions: 425172
Number of successful extensions: 1936
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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