Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E23
(902 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 32 0.45
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 32 0.45
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 3.2
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 3.2
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 3.2
At1g61080.1 68414.m06877 proline-rich family protein 29 4.2
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 29 5.6
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 5.6
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 7.4
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 28 7.4
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 28 7.4
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 28 9.7
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + PPPPP P P P PPPP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPP 516
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + PPPPP P P P PPPP
Sbjct: 427 PPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPP 485
Score = 31.9 bits (69), Expect = 0.60
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + PPPPP P P P PPPP
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPP 500
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +2
Query: 806 KTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
+ PPPPP F P P PPPP
Sbjct: 536 RPPPPPPHSPPPPQFSPPPPEPYYYSSPPPP 566
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPP 895
PPP P P V +PPPPP + P P PPP
Sbjct: 491 PPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPP 548
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/59 (25%), Positives = 16/59 (27%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + PP P P P P PPPP
Sbjct: 564 PPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPP 622
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
PPP P+ P PPPPP P P PPPPG
Sbjct: 685 PPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPPPLSKTPVPPPPPG 744
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPPPPG G P PPPP
Sbjct: 739 PPPPPGLGRGTSSGPPPLGAKGSNAPPPP 767
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P + PPPPP P P P PPPP
Sbjct: 572 PPPP---PPPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPSSR-SIPSPSAPPPPPPPPP 626
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
P PP FG P P P PPP G
Sbjct: 157 PSGPPSGARPIGFGSPPPMGPGMSMPPPSG 186
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 811 PPPPPGXXXXXXFWXPXPXXPXXXXPPXP 897
PPPPP + P P P PP P
Sbjct: 412 PPPPPSPPLPPPVYSPPPSPPVFSPPPSP 440
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +2
Query: 809 TPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
+PPPPP P P P PPPP
Sbjct: 378 SPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 407
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPPPP P P P PPPP
Sbjct: 401 PPPPPPPYVYPSPPPPPPSPPPYVYPPPP 429
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 812 PPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPPPPG P P PPPP
Sbjct: 539 PPPPPGTAAAPPPPPPPPGTQAAPPPPPP 567
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 803 KKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
+K+P PPP P P P PPPP
Sbjct: 362 EKSPVPPPRRSPPPLQTPPPPPPPPPLAPPPP 393
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 622 GGGPXPPRXFFXXGGPXXPP*RGXPXP 542
GGGP PP GGP PP G P P
Sbjct: 676 GGGPPPPPPP-PGGGPPPPPGGGPPPP 701
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +2
Query: 803 KKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
+++PPP P P P P PPPP
Sbjct: 515 RRSPPPAPVNSPPPPVYSPPPPPPPVHSPPPP 546
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/59 (27%), Positives = 16/59 (27%)
Frame = +2
Query: 722 PPPXLXXXXXXPRXPGGGVXXXFXXXXKKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
PPP P P PPPPP P P P PPP
Sbjct: 46 PPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPPRSQPPP 104
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 818 PPPGXXXXXXFGXPXPXXPXXXXPPPPG 901
PPPG + P P PPPPG
Sbjct: 38 PPPGGYPPQGYPPPPHGYPPAAYPPPPG 65
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 803 KKTPPPPPGXXXXXXFGXPXPXXPXXXXPPPP 898
+ PPPPP P P P PPPP
Sbjct: 262 RSAPPPPPAAAPPPQ--PPPPPPPKPQPPPPP 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,178,206
Number of Sequences: 28952
Number of extensions: 284332
Number of successful extensions: 1377
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2129873112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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