Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E22
         (834 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.1  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.1  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
 Frame = -1

Query: 513 CXFVFGV----TECNLLWFCWS 460
           C +++G+    T C   W CW+
Sbjct: 99  CDWLYGIFGHETSCTRYWTCWN 120


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 VIFTEQTVKLINKGTITPSVDRPT 468
           ++F    VK +N   ITP  D PT
Sbjct: 12  IVFINPLVKYLNIFFITPWYDFPT 35


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 566 RSCPPRTTVPE 598
           R C P+T VPE
Sbjct: 151 RKCKPKTVVPE 161


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/22 (27%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = -1

Query: 513 CXFVFGV----TECNLLWFCWS 460
           C  ++G+    ++C++ W CW+
Sbjct: 95  CERLYGIFADESKCDVFWNCWN 116


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/22 (27%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = -1

Query: 513 CXFVFGV----TECNLLWFCWS 460
           C  ++G+    ++C++ W CW+
Sbjct: 95  CERLYGIFADESKCDVFWNCWN 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,996
Number of Sequences: 336
Number of extensions: 2536
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)