Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E22
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875...    29   3.5  

>11_06_0209 +
           21282079-21282369,21287029-21287137,21287462-21287580,
           21287722-21287829,21287943-21288062,21288838-21289011,
           21289111-21289212
          Length = 340

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
 Frame = +2

Query: 56  VVTXFSKITTAPR*D*LCLPSLLAVCALASNATLAPRTDDVLXEQLYMSVVI----XEYX 223
           VVT F++    PR D     +L AVC    +  LAP  + ++ ++L  S  +     +Y 
Sbjct: 82  VVTTFAR----PRWDEFVRENLPAVCLNGYSTLLAPANEVLIPQELLSSKTVWTPDRQYE 137

Query: 224 TAIAKCSEYLXEXKGXVI 277
             +A+ + +  E KG ++
Sbjct: 138 DLVARVTNFHNEDKGFMV 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,019,683
Number of Sequences: 37544
Number of extensions: 294548
Number of successful extensions: 639
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)