Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E20
(894 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 37 0.025
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 36 0.058
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 36 0.058
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.093
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 33 0.24
SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.41
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 31 0.45
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 32 0.72
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.95
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 1.3
SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 1.7
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.9
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 3.3
SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0) 29 3.8
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 3.8
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 29 5.1
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 25 5.9
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 25 6.2
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 29 6.7
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 29 6.7
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 23 7.4
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 44.8 bits (101), Expect = 1e-04
Identities = 31/90 (34%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Frame = +3
Query: 375 GXPNPXGXPPFFXKXPPXGG--GGXPPXFXG----PPPPXXXXXXXXXXXXXXXXXGGXX 536
G P P G + + PP G GG PP G PPPP GG
Sbjct: 512 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQ--GGGP 569
Query: 537 PPPFXXXKKPPPXGGXFFXPPXXXXGGGGG 626
PPP PPP G PP G GGG
Sbjct: 570 PPPGAGQGGPPPPGAGQEGPPPPGAGQGGG 599
Score = 37.1 bits (82), Expect = 0.019
Identities = 29/86 (33%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
Frame = -3
Query: 622 PPPPXXXXGGXKNXPPXGGGFFX*XKGG--GXXPPXXFFFLXGGAXXXXPXXGGGGP--- 458
PPPP GG P G G+ G G PP GG G G P
Sbjct: 503 PPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPG 562
Query: 457 XXXGGXPPPPXGGXXXKKGGXPXGFG 380
GG PPPP G + G P G G
Sbjct: 563 AGQGGGPPPPGAG---QGGPPPPGAG 585
Score = 35.5 bits (78), Expect = 0.058
Identities = 29/86 (33%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = -3
Query: 622 PPPPXXXXGGXKNXPPXGGGFFX*XKGGGXXPPXXFFFLXGGAXXXXPXXGGGGPXXXGG 443
PPPP GG PP G G +G G PP GG GG P G
Sbjct: 536 PPPPGAGQGG--GPPPPGAG-----QGWGQPPPGAG--QGGGPPPPGAGQGGPPPPGAGQ 586
Query: 442 XPPPPXG---GXXXKKGGXPXGFGXP 374
PPP G G G G+G P
Sbjct: 587 EGPPPPGAGQGGGPPPPGAGQGWGLP 612
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 36.7 bits (81), Expect = 0.025
Identities = 23/63 (36%), Positives = 23/63 (36%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXK 560
P P G PP PP GG G PP G PPP GG PPP
Sbjct: 32 PAPGGYPPAPGGYPPSGGYGYPPA-GGYPPPQPGYAGGPPPPGIAPGIGG--PPPSGQYG 88
Query: 561 KPP 569
PP
Sbjct: 89 APP 91
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -3
Query: 472 GGGGPXXXGGXPPPPXGGXXXKKGGXP--XGFGXPXFXG 362
GG P GG PP P GG GG P G+G P G
Sbjct: 20 GGYPPAAPGGYPPAP-GGYPPAPGGYPPSGGYGYPPAGG 57
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/81 (29%), Positives = 25/81 (30%), Gaps = 2/81 (2%)
Frame = +3
Query: 363 PXXXGXPN--PXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXX 536
P G P P G PP PP GG P G PP GG
Sbjct: 17 PYMGGYPPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPP------AGGYPPPQPGYAGGPP 70
Query: 537 PPPFXXXKKPPPXGGXFFXPP 599
PP PP G + PP
Sbjct: 71 PPGIAPGIGGPPPSGQYGAPP 91
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 35.5 bits (78), Expect = 0.058
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 GXPNPXGXPPFFXKX-PPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFX 551
G P PP F PP PP F PPPP G PPP
Sbjct: 117 GPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQ------GSFPPPPP 170
Query: 552 XXKKPPPXG 578
K PPP G
Sbjct: 171 MGKPPPPSG 179
Score = 32.3 bits (70), Expect = 0.54
Identities = 31/131 (23%), Positives = 31/131 (23%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPP 542
P G P P K P G PP PPPP G PP
Sbjct: 141 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPP---SGNKPTFGNSRTSTNGPPPP 197
Query: 543 PFXXXKKPPPXGGXFFXPPXXXXGGGGGAXXXXXXXXXXXXXXXXXXXFFFFFXPPPPXX 722
P PP PP G G PPPP
Sbjct: 198 PHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPP--GENRPPPPMR 255
Query: 723 PXXXGAXXPPP 755
G PPP
Sbjct: 256 GPTSGGEPPPP 266
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 35.5 bits (78), Expect = 0.058
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +3
Query: 375 GXPNPXGXPPFFXKX-PPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFX 551
G P PP F PP PP F PPPP G PPP
Sbjct: 29 GPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAKKPSQ------GSFPPPPP 82
Query: 552 XXKKPPPXG 578
K PPP G
Sbjct: 83 MGKPPPPSG 91
Score = 32.3 bits (70), Expect = 0.54
Identities = 31/131 (23%), Positives = 31/131 (23%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPP 542
P G P P K P G PP PPPP G PP
Sbjct: 53 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPP---SGNKPTFGNSRTSTNGPPPP 109
Query: 543 PFXXXKKPPPXGGXFFXPPXXXXGGGGGAXXXXXXXXXXXXXXXXXXXFFFFFXPPPPXX 722
P PP PP G G PPPP
Sbjct: 110 PHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPP--GENRPPPPMR 167
Query: 723 PXXXGAXXPPP 755
G PPP
Sbjct: 168 GPTSGGEPPPP 178
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/79 (26%), Positives = 23/79 (29%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPP 542
P PNP PP PP PP PPPP PP
Sbjct: 106 PPYPPPPNPPYPPPPNAPYPP------PPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPP 159
Query: 543 PFXXXKKPPPXGGXFFXPP 599
+ PPP + PP
Sbjct: 160 LYPPPPNPPPPNAPYPPPP 178
Score = 29.5 bits (63), Expect(2) = 0.093
Identities = 20/75 (26%), Positives = 22/75 (29%), Gaps = 2/75 (2%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXK 560
PNP PP + PP PP PPPP P P
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYP 149
Query: 561 KP--PPXGGXFFXPP 599
P PP + PP
Sbjct: 150 PPPNPPYPPPLYPPP 164
Score = 24.2 bits (50), Expect(2) = 0.093
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPP 797
PPPP P PPP + P PP
Sbjct: 167 PPPPNAPYPPPPYPPPPNPPYPPPPNPPYPP 197
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 34.3 bits (75), Expect = 0.13
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXK 560
P P G P + PP GG PP PPP GG PPP
Sbjct: 935 PPPGGSAP--SQPPPPGGNAPPPP---PPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPP 989
Query: 561 KPPP 572
PPP
Sbjct: 990 PPPP 993
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/71 (35%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -3
Query: 625 PPPPPXXXXGGXKNXPPXGGGFFX*XKGGGXXPPXXFFFLXGGAXXXXPXXGGGGPXXXG 446
PPPPP PP GG PP G A P GG P G
Sbjct: 920 PPPPPPPGGNAPLPPPPPGG------SAPSQPPPP-----GGNAPPPPPPPGGSAPPPGG 968
Query: 445 GXP--PPPXGG 419
G P PPP GG
Sbjct: 969 GAPPLPPPPGG 979
Score = 33.5 bits (73), Expect = 0.24
Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = -3
Query: 628 APPPPPXXXXGGXKNXPPXGGGF-FX*XKGGGXXPPXXFFFLXGGAXXXXPXXGGGGPXX 452
AP PPP PP GG GG PP GGA P GG P
Sbjct: 930 APLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPP-----GGGAPPLPPPPGGSAPPP 984
Query: 451 XGGXPPPP 428
PPPP
Sbjct: 985 PPPPPPPP 992
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +3
Query: 420 PPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKK-PPPXGGXFFXP 596
PP G PP G P GG PPP PPP GG P
Sbjct: 925 PPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPP 984
Query: 597 P 599
P
Sbjct: 985 P 985
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P P G PP PP GG PP PPPP
Sbjct: 959 PGGSAPPPGGGAPPL---PPPPGGSAPPPPPPPPPPP 992
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 11/68 (16%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAP------XXPPQXXGG-----GGGGXGXIXFFXG 851
PPPP P PPP P PP GG GGG G
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGG 979
Query: 852 XAPXPPPP 875
AP PPPP
Sbjct: 980 SAPPPPPP 987
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGG----XPPXFXGPPPP 473
P G P PP PP GGG PP PPPP
Sbjct: 945 PPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPP 985
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +3
Query: 375 GXPNPXGXPPF-FXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFX 551
G +P PP PP GG P PPPP PPP
Sbjct: 906 GSESPSASPPGGSVPPPPPPPGGNAPL---PPPPPGGSAPSQPPPPGG---NAPPPPPPP 959
Query: 552 XXKKPPPXGGXFFXPP 599
PPP GG PP
Sbjct: 960 GGSAPPPGGGAPPLPP 975
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 874 GGGGXGAXPXKKXIXPXPPPPPP 806
GGG P P PPPPPP
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPPPP 989
Score = 23.4 bits (48), Expect(2) = 7.2
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 874 GGGGXGAXPXKKXIXPXPPPPP 809
GG P P PPPPP
Sbjct: 938 GGSAPSQPPPPGGNAPPPPPPP 959
Score = 23.4 bits (48), Expect(2) = 7.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 829 PXPPPPPP 806
P PPPPPP
Sbjct: 987 PPPPPPPP 994
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 33.5 bits (73), Expect = 0.24
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 537 PPPFXXXKKPPPXGGXFFXPPXXXXGGGG 623
P PF PPP GG F PP GGG
Sbjct: 645 PNPFFGGIPPPPPGGGMFPPPPPPPPGGG 673
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P G P P F PP GG P PPPP
Sbjct: 647 PFFGGIPPPPPGGGMFPPPPPPPPGGGVPGPPKPPPP 683
>SB_17493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 718
Score = 33.1 bits (72), Expect = 0.31
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 360 FPXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPP 470
+P G P+ PP + PP GGG PP G PP
Sbjct: 289 YPSGIGSPSIGSGPPGMEEGPPGTGGG-PPGSVGAPP 324
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 32.7 bits (71), Expect = 0.41
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGGGGGGXGXIXFFXGXAPXPPPPXF 881
PPPP P PPP A PP GGG AP PPPP F
Sbjct: 662 PPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGG-------------APPPPPPGF 707
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 438 GXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKKPPPXGGXFFXPPXXXXGG 617
G PP PPPP GG PPP PPP GG PP GG
Sbjct: 659 GPPPP---PPPPPGGQAGGAPPPPPPPLPGGAAPPP------PPPIGGGAPPPPPPGFGG 709
Score = 32.3 bits (70), Expect = 0.54
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGG 812
PPPP P GA PPP AP PP GG
Sbjct: 676 PPPPPPPLPGGAAPPPPP--PIGGGAPPPPPPGFGG 709
Score = 31.9 bits (69), Expect = 0.72
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -2
Query: 626 AXPPPPXXGGGXKKXPPXG-GGF 561
A PPPP GGG PP G GGF
Sbjct: 688 APPPPPPIGGGAPPPPPPGFGGF 710
Score = 29.1 bits (62), Expect = 5.1
Identities = 25/68 (36%), Positives = 26/68 (38%)
Frame = -3
Query: 625 PPPPPXXXXGGXKNXPPXGGGFFX*XKGGGXXPPXXFFFLXGGAXXXXPXXGGGGPXXXG 446
PPPPP PP GG + GG PP G A P GGG P
Sbjct: 660 PPPPPP---------PPPGG------QAGGAPPPPPPPLPGGAAPPPPPPIGGGAP---- 700
Query: 445 GXPPPPXG 422
PPPP G
Sbjct: 701 --PPPPPG 706
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 628 APPPPPXXXXGG--XKNXPPXGGG 563
APPPPP GG PP GGG
Sbjct: 675 APPPPPPPLPGGAAPPPPPPIGGG 698
Score = 25.4 bits (53), Expect(2) = 9.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 829 PXPPPPPPXXWGGXXGAXXXKKKKXGGGXXAP 734
P PPPPPP G GA GG P
Sbjct: 661 PPPPPPPPGGQAG--GAPPPPPPPLPGGAAPP 690
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 628 APPPPPXXXXGGXKNXPPXGG 566
APPPPP G P G
Sbjct: 699 APPPPPPGFGGFANLVKPRKG 719
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 31.5 bits (68), Expect = 0.95
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P G P P PP PP G GG PP PPPP
Sbjct: 308 PPPGGAPPPPPPPP----PPPPGDGGAPPP---PPPP 337
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGGGGGGXGXIXFFXGXAPXPPPP 875
P PP P A PPP P PP G GG AP PPPP
Sbjct: 290 PVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGG----------APPPPPP 336
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P G P PP GG PP PPPP
Sbjct: 295 PPADGSAPAPPPPPPPGGAPPPPPPPPPPPP 325
Score = 25.8 bits (54), Expect(2) = 0.45
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 829 PXPPPPPPXXWGGXXGA 779
P PPPPPP G GA
Sbjct: 314 PPPPPPPPPPPPGDGGA 330
Score = 25.4 bits (53), Expect(2) = 0.45
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 874 GGGGXGAXPXKKXIXPXPPPPPP 806
GG P P PPPPPP
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPP 309
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.9 bits (69), Expect = 0.72
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P G P P G P F P G G PP GPP P
Sbjct: 39 PPPPGPPGPDGPPGFPGPQGPNGPKG-PPGLPGPPGP 74
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 31.5 bits (68), Expect = 0.95
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 375 GXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
G P G PP PP GG PP PPPP
Sbjct: 267 GMPGMGGMPPP-GMPPPMPPGGMPPNMEQPPPP 298
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.5 bits (68), Expect = 0.95
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P P G P PP G PP + GPPPP
Sbjct: 470 PPPMGMYPPPRGFPPPPFGPPPPFYRGPPPP 500
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPP 473
P P G PP PP G PP PPPP
Sbjct: 477 PPPRGFPPPPFGPPPPFYRGPPPPRGMPPPP 507
Score = 25.0 bits (52), Expect(2) = 7.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 462 PPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKKPPPXGGXFFXPP 599
PPPP GG PP PPP GG PP
Sbjct: 428 PPPPQHTGPPQPRPPHGMPQGGG---PPQLPPNLPPPPGGMRGMPP 470
Score = 21.8 bits (44), Expect(2) = 7.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPP 755
PPPP P PPP
Sbjct: 483 PPPPFGPPPPFYRGPPP 499
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGG----GXPPXFXGPPP 470
P G P P PP F + PP G PP F PPP
Sbjct: 290 PDYRGFPPPNFPPPDFSRPPPNFNDPAFQGRPPPFVRPPP 329
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 629 GAXPPPPXXGGGXKKXPPXGGG 564
G PPPP GG PP GGG
Sbjct: 204 GIPPPPPPIRGGVPPPPPMGGG 225
>SB_3802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 881 KXXGGGXGGAPXKKXNXSXPPPPPP 807
K GGG G P + + PPPPPP
Sbjct: 161 KCSGGGEGPNPSPPPSGAPPPPPPP 185
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 1.7
Identities = 28/118 (23%), Positives = 30/118 (25%), Gaps = 6/118 (5%)
Frame = +3
Query: 420 PPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKKPPPXGGXFFXPP 599
PP G PP G PPP PPP ++PPP PP
Sbjct: 290 PPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPP 349
Query: 600 XXXXGGG--GGAXXXXXXXXXXXXXXXXXXXFF----FFFXPPPPXXPXXXGAXXPPP 755
GGA PPP P GA P P
Sbjct: 350 SMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGP 407
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +3
Query: 399 PPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKKPPPXG 578
PP PP GG PP PPPP PP PPP
Sbjct: 348 PPSMGMAPPPVGGAAPPP---PPPPPVGGPPPPPPPIEGRPPSSLGNPP------PPPPP 398
Query: 579 GXFFXPPXXXXGGGGG 626
G PP G G
Sbjct: 399 GRGAPPPGPMIPGRAG 414
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/87 (32%), Positives = 30/87 (34%), Gaps = 6/87 (6%)
Frame = -3
Query: 628 APPPPPXXXXGGXKNXPPXGGGFFX*XKG------GGXXPPXXFFFLXGGAXXXXPXXGG 467
APPPPP + PP G G GG PP GG P G
Sbjct: 325 APPPPPPSR-SSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEG 383
Query: 466 GGPXXXGGXPPPPXGGXXXKKGGXPXG 386
P G PPPP G +G P G
Sbjct: 384 RPPSSLGNPPPPPPPG----RGAPPPG 406
Score = 28.7 bits (61), Expect = 6.7
Identities = 26/84 (30%), Positives = 26/84 (30%), Gaps = 4/84 (4%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPX----FXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPF 548
P G PP PP G PP PPPP G PPP
Sbjct: 299 PPSRGAPP----PPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSR----GAPPPP- 349
Query: 549 XXXKKPPPXGGXFFXPPXXXXGGG 620
PPP GG PP GG
Sbjct: 350 SMGMAPPPVGGAAPPPPPPPPVGG 373
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 414 KXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXKKPPPXGGXFFX 593
+ PP G PP G PP GG PPP +PP G
Sbjct: 337 RPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPV--GGPPPPPPPIEGRPPSSLGNPPP 394
Query: 594 PPXXXXG 614
PP G
Sbjct: 395 PPPPGRG 401
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXK 560
P P PP PP PP PPPP PPP
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 561 KPPPXGGXFFXPP 599
PPP PP
Sbjct: 429 PPPPALRLACAPP 441
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +3
Query: 381 PNPXGXPPFFXKXPPXGGGGXPPXFXGPPPPXXXXXXXXXXXXXXXXXGGXXPPPFXXXK 560
P P PP PP PP PPPP PPP
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Query: 561 KPPP 572
PPP
Sbjct: 428 PPPP 431
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 28.3 bits (60), Expect = 8.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGGGGGGXGXIXFFXGXAPXPPPP 875
PPPP P G PPP P PP G G P PPPP
Sbjct: 714 PPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAG-----------LPPPPPP 759
Score = 24.2 bits (50), Expect(2) = 3.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 829 PXPPPPPPXXWGG 791
P PPPPPP G
Sbjct: 740 PPPPPPPPPGCAG 752
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 850 PXKKXIXPXPPPPPP 806
P P PPPPPP
Sbjct: 703 PLLSGTLPMPPPPPP 717
>SB_47179| Best HMM Match : Carboxyl_trans (HMM E-Value=0)
Length = 622
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 387 PXGXPPFFXKXPPXGGGGXPPXFXGPPP 470
P G PP PP G GG P G PP
Sbjct: 425 PKGYPPQQPSYPPGGYGGPPSAPYGAPP 452
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGGGGGGXGXIXFFXGXAPXPPPP 875
PPPP P G PPP AP P G P PPPP
Sbjct: 153 PPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPPPP 209
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Frame = +3
Query: 705 PPPPXXPXXXG-AXXPPPXFFFFXXXAPXXPPQXXGGGGGGXGX--IXFFXGXAPXPPP 872
PPPP P A PPP AP PP GG I G P PPP
Sbjct: 111 PPPPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPP 169
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 375 GXPNPXGXPPFFXKXPPXGG--GGXPPXFXGPPPP 473
G P G PP PP GG GG PP PPPP
Sbjct: 202 GQPGMWGPPP-MGGPPPMGGPPGGYPPP---PPPP 232
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPP 470
P G P P G PP PP G P + PPP
Sbjct: 209 PPPMGGPPPMGGPPGGYPPPPPPPGAGDPAY--PPP 242
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 705 PPPPXXPXXXGAXXPPPXFFFFXXXAPXXPPQXXGGGGG 821
PP P P A PP F AP PP GGGG
Sbjct: 178 PPAPPPPGAPAAPPAPP--FGGPPSAPPPPPAPPVGGGG 214
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 363 PXXXGXPNPXGXPPFFXKXPPXGGGGXPPXFXGPPP 470
P G P P G PPF + PP GG P GP P
Sbjct: 406 PRPMGPPGPHG-PPFGPRGPPP-HGGPPRGPMGPGP 439
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 25.0 bits (52), Expect(2) = 5.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 850 PXKKXIXPXPPPPPP 806
P + P PPPPPP
Sbjct: 286 PIPPTLPPPPPPPPP 300
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 829 PXPPPPPPXXWGG 791
P PP PPP GG
Sbjct: 298 PPPPLPPPPPSGG 310
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 25.0 bits (52), Expect(2) = 6.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 850 PXKKXIXPXPPPPPP 806
P + P PPPPPP
Sbjct: 62 PIPPTLPPPPPPPPP 76
Score = 22.2 bits (45), Expect(2) = 6.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 829 PXPPPPPPXXWGG 791
P PP PPP GG
Sbjct: 74 PPPPLPPPPPSGG 86
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 629 GAXPPPPXXGGGXKKXPPXGGG 564
GA P PP GGG P GGG
Sbjct: 458 GAPPLPPKRGGGPPLPPKRGGG 479
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 28.7 bits (61), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 791 APPXXXGGGGGGXXNXFFXXXRP 859
APP GGGGGG +F +P
Sbjct: 472 APPAPQGGGGGGLMKRWFSTSKP 494
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 874 GGGGXGAXPXKKXIXPXPPPPP 809
GG K P PPPPP
Sbjct: 492 GGNSRSGGSSYKSSNPPPPPPP 513
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 829 PXPPPPPP 806
P PPPPPP
Sbjct: 536 PAPPPPPP 543
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,633,435
Number of Sequences: 59808
Number of extensions: 430343
Number of successful extensions: 3981
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2682
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2562198215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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