Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E19
         (840 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0613 + 22748223-22749513,22750046-22750179,22751066-227513...    30   2.6  

>06_03_0613 +
           22748223-22749513,22750046-22750179,22751066-22751309,
           22751401-22751609,22751691-22751740,22751933-22752053,
           22752138-22752383
          Length = 764

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = -3

Query: 430 ARKTLTAXSIWSSLVWTKVSPRGSMPILYISMNCLTTSTFMYLXQLFSMLYSLAISLMSS 251
           +R TL +  +W  L   K+    ++ +L ++ NCL    +  + + FS +YSL   ++S 
Sbjct: 118 SRLTLASLGVWGELPGAKLHRLQALRVLNLTGNCL----YGAVPEHFSRMYSLQSLVLSR 173

Query: 250 N 248
           N
Sbjct: 174 N 174


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,930,743
Number of Sequences: 37544
Number of extensions: 349833
Number of successful extensions: 707
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)