Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E18
         (867 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.4  
AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens ...    30   9.5  

>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.4
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -2

Query: 548 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 432
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46268 fis, clone TESTI4027262. ).
          Length = 230

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 24/68 (35%), Positives = 30/68 (44%)
 Frame = +3

Query: 621 PPGKLPRALSCSDPGRLPDTCPPFSLREAWRXLIAHAVGISXSV*VRSAPNLGLCAXNPP 800
           PP  LP ++S S PG  P  C P S   A   ++     +  SV   S P L      PP
Sbjct: 48  PPRTLPLSVSSSLPGLCPSRCRPPSPDSAPLGVVLPPRTLPLSV-SSSLPGLCPSRCRPP 106

Query: 801 FXPXAAPL 824
             P +APL
Sbjct: 107 -SPDSAPL 113



 Score = 30.3 bits (65), Expect = 9.5
 Identities = 24/68 (35%), Positives = 30/68 (44%)
 Frame = +3

Query: 621 PPGKLPRALSCSDPGRLPDTCPPFSLREAWRXLIAHAVGISXSV*VRSAPNLGLCAXNPP 800
           PP  LP ++S S PG  P  C P S   A   ++     +   V   S P L L    PP
Sbjct: 118 PPRTLPLSVSSSLPGLCPSRCRPPSPDSASLGVVLPPRTLPL-VLSSSLPGLCLSRCRPP 176

Query: 801 FXPXAAPL 824
             P +APL
Sbjct: 177 -SPDSAPL 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,290,555
Number of Sequences: 237096
Number of extensions: 2951331
Number of successful extensions: 12375
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12373
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)