Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E17
         (880 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    63   2e-10
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    59   5e-09
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    32   0.62 
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 31/59 (52%), Positives = 36/59 (61%)
 Frame = +2

Query: 407 DLFGSGXXXXXXXXXXXXXXXLKAYADXKSKKPALIXKSSILLDVKPWDDETDMKEMEK 583
           DLFGS                L AYA+ K+KK   I KSS++LDVKPWDDETD+ EMEK
Sbjct: 89  DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEK 147



 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +1

Query: 166 LAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTSAERKTWS 324
           LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +ASYT AERKTW+
Sbjct: 18  LAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAERKTWA 71



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 622 GASKLVPVGYGINKLXXMCVI 684
           G +KL+P+GYGI KL  + VI
Sbjct: 160 GGAKLIPIGYGIKKLQIITVI 180


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 30/59 (50%), Positives = 34/59 (57%)
 Frame = +2

Query: 407 DLFGSGXXXXXXXXXXXXXXXLKAYADXKSKKPALIXKSSILLDVKPWDDETDMKEMEK 583
           DLFGS                L AYA  K+ K   I KSS++LDVKPWDDETD+ EMEK
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEK 197



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +1

Query: 622 GASKLVPVGYGINKLXXMCVI 684
           G +KL+P+GYGI KL  + VI
Sbjct: 210 GGAKLIPIGYGIKKLQIITVI 230


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -1

Query: 328 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 170
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -1

Query: 328 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 170
           P  + C QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,930,390
Number of Sequences: 27780
Number of extensions: 278011
Number of successful extensions: 697
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)