Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E16
(831 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 81 4e-14
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 67 4e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 2e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 54 3e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 54 3e-06
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.044
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.076
UniRef50_Q1DCX7 Cluster: Acetyltransferase, GNAT family; n=1; My... 35 2.9
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 3.8
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 80.6 bits (190), Expect = 4e-14
Identities = 54/101 (53%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +3
Query: 489 TSITKIDAQVRGGETRXDY*DTRRFPLEAPSVRSPVPTLPLTGYLFRLSPFGKRGAFS*L 668
TSITKIDAQVRGGETR DY DTRRFPLEAPS L PF R A+ L
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPD---TCPPFSLREAWRFL 80
Query: 669 TLXVSXFGVG-RSL-PSWAVCTXPPVQPRXLXPYXGTIXLS 785
V RS PSWAVCT PP P PY TI LS
Sbjct: 81 IAHAVGISVRCRSFAPSWAVCTNPPFSP-TAAPYPVTIVLS 120
Score = 74.1 bits (174), Expect = 4e-12
Identities = 51/116 (43%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Frame = +2
Query: 422 SKRPGTVKRPRCWRFSIGSAPLNEHHK---NRRSSQRWRNPTXLLRYQAFPPGSSLXALS 592
SK+ T R RFSIGSAPL K R + ++ R+ P +L
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 593 CSDPAAYRIPVPPFSLREAWRFLIAHAVXISXRCRSFAPKLGCVHEXPGSAPXAXP 760
C P PPFSLREAWRFLIAHAV IS RCRSFAP V P +P A P
Sbjct: 62 CRLPDT----CPPFSLREAWRFLIAHAVGISVRCRSFAPS-WAVCTNPPFSPTAAP 112
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 67.3 bits (157), Expect = 4e-10
Identities = 36/80 (45%), Positives = 46/80 (57%)
Frame = -2
Query: 785 TQXDXTRIRGQRSGLNRGXRAHSPAWXXXXXXXXXXXXXEL*ESATLPEGRKAEQVSGKR 606
TQ D R +G+ S RG RA+SPAW ++ P+G+KAEQVSGKR
Sbjct: 11 TQDDSYR-KGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKR 69
Query: 605 QGRNRRAHXGSFQGETPGIL 546
QGRNRRAH G+ ++P L
Sbjct: 70 QGRNRRAHEGAAGEKSPASL 89
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -3
Query: 430 PFAGLLLTCSFLRYXLILWITVLPPLSELIPLAAAERP 317
P LLTCSF Y LILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 58.4 bits (135), Expect = 2e-07
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Frame = +2
Query: 254 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQXITQERTCEQKASKRP 433
R +C G +PLPRSLTR ARSFGCGERY+LT G T++ +++
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD----GDGNFLEDTRKTLSKEEI---- 77
Query: 434 GTVKRPRCWRFSIGSAPLNEHHKN------RRSSQRWRNPTXLLRYQAFPPGSSLXALSC 595
RPR RFSIGSAPL K+ + Q +++P R+ P +L L
Sbjct: 78 ----RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPR---RFPLVAPSCALLFLPF 130
Query: 596 SDPAAYR 616
P ++R
Sbjct: 131 GLPVSFR 137
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.2 bits (127), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 230 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQXITQ 397
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ Q + Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/81 (41%), Positives = 41/81 (50%)
Frame = +2
Query: 584 ALSCSDPAAYRIPVPPFSLREAWRFLIAHAVXISXRCRSFAPKLGCVHEXPGSAPXAXPL 763
ALSCS+PA RIPVPPFSL + + IS RCRSFAP V + P +P A P
Sbjct: 45 ALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPS-WAVSKNPPFSPTAAPY 103
Query: 764 XGYXXLEFQPXKTPTYXPLGS 826
+ P + T GS
Sbjct: 104 P--VTVHLSPTRKSTQNATGS 122
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +3
Query: 489 TSITKIDAQVRGGETRXDY*DTRRFPLEAPS 581
TSITK DAQ+ GGETR DY DTRRFPL APS
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPS 90
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 45.2 bits (102), Expect = 0.002
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = +1
Query: 625 SAFLPSGSVALSHSSRCXYLXSV 693
SAFLPSGSVALSHSSRC YL SV
Sbjct: 15 SAFLPSGSVALSHSSRCRYLSSV 37
Score = 34.7 bits (76), Expect = 2.9
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +3
Query: 582 VRSPVPTLPLTGYLFRLSPFG 644
+RSPVPTLPLTGYL P G
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 349 HSKAVIRLSTESGDNAGKNM 408
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.044
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 228 SALMNRPTRGERRFAYW 278
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.076
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 300 ERGSGRAPNTQTASPRALADSLMQ 229
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q1DCX7 Cluster: Acetyltransferase, GNAT family; n=1;
Myxococcus xanthus DK 1622|Rep: Acetyltransferase, GNAT
family - Myxococcus xanthus (strain DK 1622)
Length = 266
Score = 34.7 bits (76), Expect = 2.9
Identities = 24/78 (30%), Positives = 38/78 (48%)
Frame = -2
Query: 590 RAHXGSFQGETPGILIVXSGFATSDLSVDFCDARSGGRSLWKNASNAAFLRFLAFCWPFA 411
R+ G+ +TPG+L+V SG + +V C AR + AA F +PFA
Sbjct: 29 RSLPGAIVKDTPGLLLVDSGLPCNTFNV-VCRARLERHEADARIA-AAVSHFRDKAFPFA 86
Query: 410 HMFFPALSPDSVDNRITA 357
P +P+ +D R++A
Sbjct: 87 WWVGPDAAPEDLDARLSA 104
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 34.3 bits (75), Expect = 3.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 439 GSWPFAGLLLTCSFLRYX---LILWITVLPPLSELIPLAAAERP 317
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 111 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 278
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,750,059
Number of Sequences: 1657284
Number of extensions: 14197105
Number of successful extensions: 38586
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 37004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38567
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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