Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E14
(855 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 114 3e-24
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 110 4e-23
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 110 4e-23
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 99 1e-19
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 97 7e-19
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 95 3e-18
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 91 4e-17
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 81 5e-14
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 75 2e-12
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 74 4e-12
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 72 2e-11
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 67 5e-10
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 66 8e-10
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 61 4e-08
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 59 2e-07
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 57 5e-07
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 56 9e-07
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 56 2e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 43 0.009
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 42 0.020
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 40 0.11
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 38 0.24
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 35 3.0
UniRef50_Q946Y5 Cluster: Extracellular polypeptide Ecp88; n=2; C... 33 6.9
UniRef50_P43158 Cluster: Thiol protease/hemagglutinin prtT precu... 33 6.9
UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=2... 33 9.2
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 114 bits (274), Expect = 3e-24
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQRK 425
Y FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK+ FPRDM+RPQ VQRK
Sbjct: 26 YTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFPRDMARPQNVQRK 82
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 110 bits (265), Expect = 4e-23
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++AS
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 260 NVPAP 274
AP
Sbjct: 61 GECAP 65
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 110 bits (265), Expect = 4e-23
Identities = 50/65 (76%), Positives = 55/65 (84%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++AS
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 260 NVPAP 274
P P
Sbjct: 61 GYPLP 65
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 407
Y + LPKLYAKLHYCVSCAIHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 59 YEGYPLPKLYAKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS 250
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ S
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVS 57
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPP 374
+ + LPKLY KLHYCVSCAIHSKVVRNRS++ + RTPP
Sbjct: 59 FDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 96.7 bits (230), Expect = 7e-19
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +AS
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 260 NVPAP 274
P
Sbjct: 61 GYTLP 65
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 419
Y + LPKLYAK YCVSCAIHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 59 YEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 94.7 bits (225), Expect = 3e-18
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S +
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 260 NVPAP 274
P
Sbjct: 61 KYKLP 65
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 264 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 419
++LPK Y KL YCVSC IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 62 YKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 90.6 bits (215), Expect = 4e-17
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++AS P
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 260 NVPAP 274
P
Sbjct: 61 EYALP 65
Score = 66.1 bits (154), Expect = 1e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 377
YP + LPK Y KLHYCVSCAIH+++VR RS++DR+ R PP+
Sbjct: 59 YPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 80.6 bits (190), Expect = 5e-14
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +2
Query: 95 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS 250
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++AS
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEAS 52
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 264 FQLPKLY--AKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQRK*FII 437
+ LPKLY KL+YCV CAIH KVVRN K + +T P P + PQ + F++
Sbjct: 57 YVLPKLYLYVKLNYCVRCAIHGKVVRNPPCKAHKDQTHPPRFRPSRSAAPQPPPKPMFLL 116
Query: 438 K 440
+
Sbjct: 117 R 117
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Frame = +2
Query: 80 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASX 253
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 254 I--PNVPAP 274
+ N P P
Sbjct: 61 VYGANFPMP 69
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 246 PLXYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNF 386
P+ F +PKLY K +C++CAIHS+ VR R +R+IR K F
Sbjct: 60 PVYGANFPMPKLYMKQRFCIACAIHSRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 74.1 bits (174), Expect = 4e-12
Identities = 31/56 (55%), Positives = 42/56 (75%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDA 247
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDA 56
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 371
Y ++LPK Y K +YCVSCA+H VVR R+ RR R P
Sbjct: 59 YQGYELPKTYQKQYYCVSCAVHRHVVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIND 244
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI +
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQE 55
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +3
Query: 264 FQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQA 413
F +PK+Y KL YCVSCAIH+++VR RS +DRR R K R RP+A
Sbjct: 64 FTMPKIYVKLSYCVSCAIHARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 67.3 bits (157), Expect = 5e-10
Identities = 28/56 (50%), Positives = 42/56 (75%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDA 247
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDS 56
Score = 40.3 bits (90), Expect = 0.060
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 365
Y + +PKLY K + + AIH+++VR RSK DR+ R
Sbjct: 59 YEYYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR 95
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 66.5 bits (155), Expect = 8e-10
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 260 N 262
N
Sbjct: 139 N 139
Score = 61.3 bits (142), Expect = 3e-08
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +3
Query: 270 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSN 383
+PKLY KL YC+SCAIHS+VVR R +DRRIR PP N
Sbjct: 144 IPKLYVKLQYCISCAIHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2
Query: 110 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS 250
AK G GHV+ V C + A C+PKDKAI KF+I+NI+EAAAVRDI+ A+
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAI-KFIIQNILEAAAVRDIDKAN 57
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTP 371
+ + LP LY KLHYCVSCAIHS+VVRN K RR P
Sbjct: 59 FKAYMLPMLYVKLHYCVSCAIHSEVVRNHLLKLRRTEHP 97
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/65 (38%), Positives = 39/65 (60%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIP 259
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + +P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 260 NVPAP 274
AP
Sbjct: 61 GYKAP 65
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 57.2 bits (132), Expect = 5e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPK 377
+ + LPKLY K++Y +S AIHSKVVR RS++ RRIR PPK
Sbjct: 168 FESYTLPKLYRKVYYSISAAIHSKVVRVRSREARRIRDPPK 208
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +2
Query: 131 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXIPNVPAP*VIR 286
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + P + R
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYR 178
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 56.4 bits (130), Expect = 9e-07
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = +2
Query: 122 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXI 256
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+ +
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVL 78
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 55.6 bits (128), Expect = 2e-06
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = +2
Query: 92 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS 250
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A+
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQAT 54
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/37 (48%), Positives = 28/37 (75%)
Frame = +3
Query: 255 YPMFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIR 365
Y +F++P++ K +CVSCA H+K+VR RS + R+IR
Sbjct: 56 YDVFEVPRMGYKSQFCVSCACHAKIVRVRSSQARKIR 92
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 531 DPDMIRYIDEFGQTTTRMQ 587
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Frame = +2
Query: 86 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVR 232
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR 53
Score = 33.5 bits (73), Expect = 6.9
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3
Query: 276 KLYAKLHYCVSCAIHSKV 329
+ Y KLH CVSCAIH KV
Sbjct: 53 RFYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 41.9 bits (94), Expect = 0.020
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAI 187
M +KR + GR K +G V+C NC R VP DKAI
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAI 36
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 80 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASXI 256
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++ I
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI 59
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 38.3 bits (85), Expect = 0.24
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 86 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIK 190
+KR+N GR K +G V C NC + +P+ KA++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVR 41
Score = 34.7 bits (76), Expect = 3.0
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 270 LPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQ 410
+P+ Y YCV+CAI+ +++ RS+ +R+ + P R RPQ
Sbjct: 64 VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -3
Query: 277 LGSWN--IGYXRGIVNISDRRRFYDVPNHELFDSLVFWHAPRAVCASHGFNVTTSMLGAS 104
+G W RG ISD F DV + D LV W+ V S +VT+++L ++
Sbjct: 62 VGLWKSIFSVDRGFRQISDSSSFNDVSDSHSLDGLVLWNRSGTVDTSDRLDVTSTLLVST 121
Query: 103 SITALTSH 80
++L H
Sbjct: 122 VGSSLLWH 129
>UniRef50_Q946Y5 Cluster: Extracellular polypeptide Ecp88; n=2;
Chlamydomonas|Rep: Extracellular polypeptide Ecp88 -
Chlamydomonas reinhardtii
Length = 595
Score = 33.5 bits (73), Expect = 6.9
Identities = 13/42 (30%), Positives = 28/42 (66%)
Frame = -3
Query: 295 WSLAYNLGSWNIGYXRGIVNISDRRRFYDVPNHELFDSLVFW 170
W +NLGS+ + Y VN++ +++F+++PN + D++ +W
Sbjct: 367 WQNPWNLGSYGVDY----VNLAAQQKFWNIPNKQT-DAVYYW 403
>UniRef50_P43158 Cluster: Thiol protease/hemagglutinin prtT
precursor; n=3; Porphyromonas gingivalis|Rep: Thiol
protease/hemagglutinin prtT precursor - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 868
Score = 33.5 bits (73), Expect = 6.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 11 TTHYRESLRFARRSLFTGSEVRNMTRK 91
T HY++SLR+ RSL G E ++M RK
Sbjct: 282 TFHYKKSLRYIHRSLLPGKEWKDMIRK 308
>UniRef50_A5GMY9 Cluster: Aldo/keto reductase family protein; n=21;
Cyanobacteria|Rep: Aldo/keto reductase family protein -
Synechococcus sp. (strain WH7803)
Length = 385
Score = 33.1 bits (72), Expect = 9.2
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 47 RSLFTGSEVRNMTRKRRNG-GRAKHGRGHVKAVRCTNCARCVPK 175
R+L G ++R +R N GRA H VKA C +C C+P+
Sbjct: 314 RNLTLGHDLREFAEERYNLIGRAGHWWETVKADACAHCGDCLPR 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,375,865
Number of Sequences: 1657284
Number of extensions: 14159644
Number of successful extensions: 35796
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35633
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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