Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_E13
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 128 4e-30
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 128 4e-30
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 126 2e-29
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 109 3e-24
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 109 3e-24
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 106 2e-23
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 79 4e-15
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 79 4e-15
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 59 3e-09
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 31 1.4
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 28 7.3
U88177-2|AAB42291.1| 358|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 28 7.3
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 28 7.3
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 128 bits (310), Expect = 4e-30
Identities = 60/67 (89%), Positives = 64/67 (95%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIGDAAKNQLTT 468
GT+IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF+ D G+RLIGDAAKNQLT
Sbjct: 33 GTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTI 92
Query: 469 NPENTVF 489
NPENT+F
Sbjct: 93 NPENTIF 99
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 128 bits (310), Expect = 4e-30
Identities = 60/68 (88%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
Frame = +1
Query: 289 IGTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIGDAAKNQLT 465
+GT+IGIDLGTTYSCVGV+KNGRVEIIANDQGNRITPSYVAF+ D GERLIGDAAKNQLT
Sbjct: 29 MGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLT 88
Query: 466 TNPENTVF 489
NPENT+F
Sbjct: 89 INPENTIF 96
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 126 bits (304), Expect = 2e-29
Identities = 59/66 (89%), Positives = 63/66 (95%), Gaps = 1/66 (1%)
Frame = +1
Query: 295 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQD-GERLIGDAAKNQLTTN 471
T+IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF+ D G+RLIGDAAKNQLT N
Sbjct: 34 TIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTIN 93
Query: 472 PENTVF 489
PENT+F
Sbjct: 94 PENTIF 99
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 109 bits (261), Expect = 3e-24
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 480
+GIDLGTTYSCVGV+ +G+VEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 65
Query: 481 TVF 489
TVF
Sbjct: 66 TVF 68
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 109 bits (261), Expect = 3e-24
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 480
+GIDLGTTYSCVGV+ +G+VEIIANDQGNR TPSYVAFT D ERLIGDAAKNQ+ NP N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 65
Query: 481 TVF 489
TVF
Sbjct: 66 TVF 68
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 106 bits (255), Expect = 2e-23
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 480
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 481 TVF 489
TVF
Sbjct: 66 TVF 68
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 106 bits (255), Expect = 2e-23
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 480
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 481 TVF 489
TVF
Sbjct: 66 TVF 68
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 106 bits (255), Expect = 2e-23
Identities = 48/63 (76%), Positives = 56/63 (88%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNPEN 480
IGIDLGTTYSCVG+Y+NG+VEI+AN +GN+ TPSYVAFT D ERL+GDAAK+Q NPEN
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 481 TVF 489
TVF
Sbjct: 66 TVF 68
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 79.0 bits (186), Expect = 4e-15
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 292 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 471
G VIGIDLGTT SCV + + ++I N +G R TPS VAFT DGERL+G AK Q TN
Sbjct: 31 GHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
Query: 472 PENTVF*CPSV*LVXNXXXQP-VXHDVKFLP 561
NT+F + L+ P V D+K +P
Sbjct: 91 SANTLF--ATKRLIGRRYEDPEVQKDLKVVP 119
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 79.0 bits (186), Expect = 4e-15
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Frame = +1
Query: 292 GTVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 471
G VIGIDLGTT SCV + + ++I N +G R TPS VAFT DGERL+G AK Q TN
Sbjct: 31 GHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTN 90
Query: 472 PENTVF*CPSV*LVXNXXXQP-VXHDVKFLP 561
NT+F + L+ P V D+K +P
Sbjct: 91 SANTLF--ATKRLIGRRYEDPEVQKDLKVVP 119
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKN 456
IGIDLGTT+SCV Y+NG+V I+ N+ G R TPS +A +DG+ LIG AK+
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD 54
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1
Query: 301 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKN 456
IGIDLGTT+SCV Y+NG+V I+ N+ G R TPS +A +DG+ LIG AK+
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKD 54
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 298 VIGIDLGTTYSCVGVYK--NGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTN 471
+ GIDLGTTYS +G+Y G I+ +D G + PS VAF +G LIG A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 472 PENTVF 489
P+ T++
Sbjct: 95 PKRTIY 100
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 295 TVIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTQDGERLIGDAAKNQLTTNP 474
+V+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ +TTN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 475 ENTV 486
+NTV
Sbjct: 61 KNTV 64
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 307 IDLGTTYSCVGVYKNG-RVEIIANDQGNRITPSYVAFTQDGERLIGDAA 450
IDLGT + +G+ K G ++I N + R TP+ V QDG R DAA
Sbjct: 29 IDLGTQFLKIGIVKPGIPMDIALNTESRRKTPN-VVMIQDGHRTFADAA 76
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 316 GTTYSCVGVYKNGRVEIIANDQGNRITPSYVAF---TQDGE-RLIGDAAKNQLT 465
G +G Y + +I +DQ + +T + AF T DG+ ++ GD AKN+ T
Sbjct: 40 GCNKRIIGYYFATQTSVITSDQVSNLTHAVFAFVNITSDGQLQIDGDLAKNRFT 93
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 503 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 533
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 503 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 533
>U88177-2|AAB42291.1| 358|Caenorhabditis elegans Hypothetical
protein F53E10.5 protein.
Length = 358
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 529 QPVXHDVKFLPPSRSFEKNXPXPMFQLQLP 618
QP D + PPS + +N P PM+Q +LP
Sbjct: 68 QPTEIDPR--PPSYTVNENHPDPMYQRELP 95
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 489 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 519
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 307 YRLLCRCPYLSPSCRRHKRPRPPKLARTNST 215
+R LC YL P C+ H P L + ++T
Sbjct: 503 FRCLCEAGYLPPFCKVHTNPCYQNLCQNSAT 533
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,585,549
Number of Sequences: 27780
Number of extensions: 335008
Number of successful extensions: 775
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -