Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_E13
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 331 MSKWYPNRYRLLCRCPYLSPSCRR 260
           MS  Y N ++  CRC   +PS  R
Sbjct: 319 MSAKYRNAFKETCRCSPSNPSITR 342


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -1

Query: 129 DHFKMLLSNTCVFKQYTDTFRSIVQEKRXNLKEFPI 22
           +H + L+SN  +   YT      +Q++  +++  P+
Sbjct: 15  NHKEQLISNDYILDNYTSPIVEFLQQEDSSIRRDPL 50



 Score = 23.0 bits (47), Expect = 3.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 297 SNRYRFGYHLLMCRCLQKWT 356
           SN++R  + L++  C  KW+
Sbjct: 352 SNKFREAFKLMLPNCCGKWS 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,560
Number of Sequences: 438
Number of extensions: 4059
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)